Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0418 ATGGGTAATAAAATTGGTAGGGCGATAAAGAGTAGGAGAGGGTCAAATTTGGGAGAATCCGATGTCCATGTCCATGGTTTTGGTTCGGTGGTGGACAGTGCCATAAGGACAGCGTCAAATGCAGGAACAGATGTCTATAGTTTTTCTGAGACAGTGGACAATCCGATGAGGAGTAGCGGTGCGCCAAATAACCTTCATGTCCATGTCCATGGTTTTGGTTCGGTGGTGGACAGTGCCATAAGGACAGCGTCAAATGCAGGAACAGCTGTCTATAGTTTTGCTGAGGCAGTGGACAATGCAATGAGGAGTAGTGGAATTGATGAGTCTGTCCATGGTTTTGCTTCGGCAGTGGACAATGGCATCATGAGTAGTAACTTAGAGGTTTCTGCTTCTGCTTTAGTTGATGTTCACAATCTGTCGCCAAATGGAAGTGGGTGGCAAAAGGGCGATTTCTTAGGAAATGGCTCCTTTGGGACCGTCTATGAAGGCTTCACCGATGATGGAAGCTTCTTTGCTGTAAAGGAGGTGTCTTTGCTGGATGACAGAAGCCAGGGCAAACAGAGCATTTTCCAACTTCAGCAGGAAATATCTCTTTTGAGTCAGCTCCGACATGACAACATAGTTCGATATCTAGGCACAGAACAGGATAATTATAAGCTGTATATCTTCCTTGAGCTTGTAACAAAAGGATCATTAAGAAGTCTCTATCATAAGTATCGTTTAACGGACTCTCAAGCTTCTGCATACACAAGGCAGATTTTGAGTGGCTTGAAGTATCTTCACGATCGTAATGTGATTCACAGGGACATCAAGTGTGCCAATATATTGGTTGATGCAAATGGTTCCGTCAAGCTTGCAGATTTTGGTTTGGCAAAGGCAACCAAGTCGAATGATGTTAAATCAATTGGAGGCTCCCCGTACTGGATGGCCCCTGAGGTTGTCAAGTTAAGGAAACATGGATATGGACTAGCAGCTGATATATGGAGCTTAGGATGTACAGTTTTAGAGATGTTGACGTGCCAACCTCCTTACTCTCATTTGGGCAAAATGGAAGCGCTATCTCTGATTGGCAAGGGTCATCCTCCACCTCTTCCGGAATCTTTGTCAACAGATGCCCGAGATTTCATTCTTAAATGCTTACAAGTTAACCCAAACAAACGCCCAACTGCTGCTCAACTATTGGACCATCCATTTCTAAAGAGAATTTCGTAA 1212 0.4422 MGNKIGRAIKSRRGSNLGESDVHVHGFGSVVDSAIRTASNAGTDVYSFSETVDNPMRSSGAPNNLHVHVHGFGSVVDSAIRTASNAGTAVYSFAEAVDNAMRSSGIDESVHGFASAVDNGIMSSNLEVSASALVDVHNLSPNGSGWQKGDFLGNGSFGTVYEGFTDDGSFFAVKEVSLLDDRSQGKQSIFQLQQEISLLSQLRHDNIVRYLGTEQDNYKLYIFLELVTKGSLRSLYHKYRLTDSQASAYTRQILSGLKYLHDRNVIHRDIKCANILVDANGSVKLADFGLAKATKSNDVKSIGGSPYWMAPEVVKLRKHGYGLAADIWSLGCTVLEMLTCQPPYSHLGKMEALSLIGKGHPPPLPESLSTDARDFILKCLQVNPNKRPTAAQLLDHPFLKRIS* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0418 403 ProSiteProfiles Protein kinase domain profile. 146 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0418 403 Pfam Protein kinase domain 147 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0418 403 PANTHER BNAA02G34600D PROTEIN 95 401 - -
Gso15g0418 403 SMART serkin_6 146 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0418 403 ProSitePatterns Protein kinases ATP-binding region signature. 152 174 IPR017441 GO:0005524
Gso15g0418 403 Gene3D Transferase(Phosphotransferase) domain 1 144 403 - -
Gso15g0418 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Gso15g0418 403 SUPERFAMILY Protein kinase-like (PK-like) 144 401 IPR011009 -
Gso15g0418 403 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 95 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0418 Gso-Chr15 3818421 3824667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0418 122 401 MAP Kinase Kinase Kinase AT4G08500 62.456 5.91e-121 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso15g0418 Pkinase 7.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0418 - K13414 gmx:100806902 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0418 15 3818421 3824667 Gso5g1049 5 33594148 33599759 PCT
Gso15g0418 15 3818421 3824667 Gso8g0649 8 5992066 5997504 PCT