Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0393 ATGAGGATGAAGATTGTTGTGATGCTATTGCTACCTTTGATGTTTGCACTGTTTTCATGCACGAGTTCTGCAAATACAACTACATGCCCCATGGACTTGAATTATGTGCTGAGAATCCCATGGAACACTTCTGCTTGCCACAACTTCCAACAAACTTTGGCGGCTAAAAATGGAACCGATGCAAACACTTGTTGCATATCTCTCTTGTCCCTCTTCGGCATAGGACTTGCACAGCATCTCAAGGAGACTTCTCAGTTCCAACTCCCAAACCTTGCCACCTCCCTTTCGTGCATCCAAGACTTCCAATTAAAGCTCTCTTCCCTCTCTCTCCCCAGCAACCTCGCTGACACCTGCTTTGACCCACTTCAGTTTGTGATCTCCCCAAACATCTGTGCTGGAATTCAAACCATCCCTGATTGGACCAAAAAGCTTGGTCAGTCCACACCACTCAACACTGCTTGCAAATCAGATCTGACTGATATCTCTCTCTGTGATGTGTGTCTGCAAGCTGGCTTACAGGCCAAGCAGGTGCTTATTTCTATTGATGGTAATGCTTCACATTCCATTGACTGTTTTTACTTTGCCATTCTCTATGCTGCTGGGGTTGTCAATGAGTTTGGACCTGAAAGCAATGGTGCTGTCAGTTGCATTTTTAGCATATCGGTTTATTCACAAGGGGGCTCTGGGGGAAAGGGTCACCAGGCTCTTGTGTTTGGTTTGACAGGTGCCGGGATTGCTTTGTTGGTCATGTCTTCCTTTTTGGGGATTTATGCATGGTATGACAGGAAGCATAGGAGAAAAAAGCTTGAGACTTTTCAGTTTGATTTTGACCCTGAGGAACAAGGCTCTAGGCCTAGATTGAGACCCAATACCGGGTCAATTTGGTTCAAAATTGAGGAACTTGAGAAGGCTACTGATAACTTTTCATCTAAGAACTTCATTGGCCGAGGTGGGTTTGGGATGGTCTTCAAGGGAACCTTGTCTGATGGAACTGTGGTGGGGGTTAAAAGGATCTTGGAATCTGATTTTCAAGGGGATGCTGAGTTTTGTAATGAGGTGGAGATCATTAGCAACCTCAAGCACCGGAATCTGGTGCCCCTTAGGGGCTGTTGTGTGGCTGAGGAGAATGAGAATTATGATGAAAGGGGAAGCCAAAGGTATCTTGTGTATGATTACATGCCAAATGGGAACCTGGAGGACCATCTCTTTTTATCAACGGACTCTCAGAAAGCAAAAGGGTCATTGACTTGGCCTCAGAGGAAAAGCATAATCTTGGATGTGGCAAAGGGGTTGGCCTATTTGCACTATGGAGTTAAACCTGCTATTTTTCACAGAGATATCAAGGCCACCAATATACTACTTGATGCAGATATGAGGGCAAGAGTTGCTGATTTTGGACTTGCCAAACAAAGTAGGGAGGGCCAGTCTCATCTCACAACTAGAGTGGCTGGAACTCATGGATATCTAGCACCAGAATATGCACTCTATGGTCAACTCACTGAGAAGAGTGATGTGTATAGTTTTGGTGTGGTTGCTTTGGAGATAATGTGTGGGAGGAAGGCTCTTGACTTGTCTTCATCAGGATCACCAAGGGCATTCTTGATCACAGATTGGGCTTGGTCATTGGTGAAGGCTGGGAAGATAGAAGAGGCTCTTGATGCTTTCCTGGTGAAGGATGAGAACTTTCCTAGTTCAAATCCAAAGAGCATAATGGAGAGGTTTTTGCTGGTGGGAATTCTGTGCTCCCATGTGATGGTTGCTTTGAGGCCAACAATTGCTGATGCTTTGAAGATGTTGGAAGGTGACATTGAGGTTCCACAAATCCCTGATCGCCCTATGCCACTTGGCCATCCTTCGTTTTATAATAATAATAATAATGATGGCAGTACTTTTAGCATATCCCCAGCATTAAGCGGCCCCAAATTGCAAACTGGAGACATGCTCAGGTAA 1950 0.4508 MRMKIVVMLLLPLMFALFSCTSSANTTTCPMDLNYVLRIPWNTSACHNFQQTLAAKNGTDANTCCISLLSLFGIGLAQHLKETSQFQLPNLATSLSCIQDFQLKLSSLSLPSNLADTCFDPLQFVISPNICAGIQTIPDWTKKLGQSTPLNTACKSDLTDISLCDVCLQAGLQAKQVLISIDGNASHSIDCFYFAILYAAGVVNEFGPESNGAVSCIFSISVYSQGGSGGKGHQALVFGLTGAGIALLVMSSFLGIYAWYDRKHRRKKLETFQFDFDPEEQGSRPRLRPNTGSIWFKIEELEKATDNFSSKNFIGRGGFGMVFKGTLSDGTVVGVKRILESDFQGDAEFCNEVEIISNLKHRNLVPLRGCCVAEENENYDERGSQRYLVYDYMPNGNLEDHLFLSTDSQKAKGSLTWPQRKSIILDVAKGLAYLHYGVKPAIFHRDIKATNILLDADMRARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVALEIMCGRKALDLSSSGSPRAFLITDWAWSLVKAGKIEEALDAFLVKDENFPSSNPKSIMERFLLVGILCSHVMVALRPTIADALKMLEGDIEVPQIPDRPMPLGHPSFYNNNNNDGSTFSISPALSGPKLQTGDMLR* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0393 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Gso15g0393 649 ProSiteProfiles Protein kinase domain profile. 308 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0393 649 Pfam SPARK 24 192 IPR043891 -
Gso15g0393 649 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Gso15g0393 649 Pfam Protein kinase domain 310 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0393 649 Gene3D Phosphorylase Kinase; domain 1 279 392 - -
Gso15g0393 649 SMART serkin_6 308 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0393 649 Gene3D Transferase(Phosphotransferase) domain 1 393 607 - -
Gso15g0393 649 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 639 - -
Gso15g0393 649 CDD STKc_IRAK 314 601 - -
Gso15g0393 649 SUPERFAMILY Protein kinase-like (PK-like) 287 600 IPR011009 -
Gso15g0393 649 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 14 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0393 Gso-Chr15 3631328 3634063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0393 19 649 Receptor kinase-like Gene Family AT1G11050 64.399 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Gso15g0393 Pkinase 7.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0393 - - gmx:100806560 1304.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0393 15 3631328 3634063 Gso8g1553 8 15105573 15108897 GST
Gso15g0393 15 3631328 3634063 Gso8g1062 8 9830175 9834226 PCT