Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0387 ATGGAGAAAATGGAGCAGTTCATTGATAACTTGCCGCCGATGGATCTGATGCGATCGGAGAAGATGACCTTCGTTCAGCTCATCATCCCCGTCGAGTCCGCGCACCGCGCCATCTCCTATTTAGGTGAACTCGGCCTTCTCCAATTCCGCGACTTAAATGCTGATAAAAGCCCCTTTCAGAGAACATTTGTCAATCAGGTAAAGCGATGTGCAGAAATGTCAAGAAAGCTTCGATTCTTCAAGGATCAAATCAGTAAAGCTGGCCTAATGTCTTCTTCTCGTACTGTATTGCAACCAGATATAGACTTGGAGGATTTAGAGATACAACTTGCTGAACATGAACATGAGCTGATCGAAATGAACTCTAACAGTGACAAACTTCAGCAATCATATAATGAACTCCAGGAATTCAAGATTGTATTACAAAAGGCATGTGGTTTTCTTGTTTCCAAACATAGCCTTGCGGTTTCAGATGAAAGAGAACTACAAGAGAATGTATATTCAAATGATGCCTATGTTGAGACAGGATCTTTGCTTGAACAGGAAATGAGGCCTCAGTCATCAAACTCGTCTGGTTTAAGATTTATCAGTGGGATTATTTGTAAATCCAAGGTTCTTAGGTTTGAAAGGATGTTGTTTCGTGCTACGAGAGGCAATATGCTTTTCAATCAGGCACCGGATGATGAACTAATCATGGATCCTGTTTCAGCCGAGATGATTGAAAAAACAGTGTTCGTTGTGTTTTTCTCTGGGGAACAGGCAAGAACCAAGATTCTGAAAATTTGTGAGGCATTTGGTGCAAATTGTTATCCTGTTCCTGAAGATATTAGTAAGCAGAGGGAAATAACTAGAGAGGTTTCATCACGTCTTACGGACTTAGAGGCAACTTTGGAAGCTGGGATTAGGCACCGGAACAAGGCTCTAGCTTCTGTTGCAGACCATCTAGCAAAATGGATAAACATGGTAAGAAGAGAGAAGGCTGTGTATGATACACTGAACATGTTAAACTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGCTGGTGTCCTCTGTTTGCAAAAACACAGATGCAGGAGGTACTGCAACGTGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTCCATCCAATGGATGCAGTGGAGTCACCACCTACATATTTTAGGACCAACACTTTCACAAATCCATATCAAGAAATTGTTGATGCATATGGTGTTGCAAGATACCAAGAAGCAAATCCTGCAGTTTACACAACTATTATATTCCCTTTCCTATTTGCTTTGATGTTTGGGGACTGGGGTCATGGAATTTGCCTATTGCTAGGAGCATTGGTTCTTATAGCACGTCAAAACAAGCTCAGCACACAGAAACTTGGAAGCTTTATGGAGATGCTATTTGGTGGGCGCTATGTGCTTCTTCTAATGGCACTGTTTTCAATCTATTGTGGCTTAATCTACAATGAATTCTTTTCTGTTCCCTTTCACATATTTGGTGCATCGGCTTACAAATGCCGTGATAGTTCATGCAGGGATGCACATACTATTGGGTTAATCAAATACCAAGATCCATACCCGTTTGGTGTGGATCCCAGCTGGCGTGGAAGTCGATCAGAATTGTCTTTCCTAAACTCTTTGAAGATGAAGATGTCCATTCTGTTTGGTGTGGCACATATGAACTTAGGAATTATATTGAGTTATTTTAATGCTCATTTCTTTCAAAACTCACTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTCCTTAACAGTCTATTTGGGTATCTTTCCGTTCTCATTGTTATCAAGTGGTGTACTGGCTCTCAAGCAGACCTTTATCATGTAATGATATACATGTTTTTAAGCCCCACAGACAATCTTGGCGAGAATCAGTTGTTCTGGGGCCAAAGACCTCTTCAAATTGTGTTATTGCTTTTGGCTGTAATTGCAGTTCCGTGGATGCTCTTTCCAAAACCTTTTATACTAAAAAAGCTTCATACTGAGAGGTTTCAAGGTCGTAGTTATGGTATACTGAATACCTCTGAGGTGGATCTTGAGGCTGAACCTGATTCTGCCAGACAACATCATGAAGAATTCAATTTCAGTGAGGTCTTTGTTCACCAAATGATCCACGCCATTGAATTTGTTCTAGGTTCAGTTTCTAATACAGCATCATATCTTCGTCTTTGGGCACTAAGTTTGGCTCACTCAGAACTTTCTACTGTTTTCTATGAGAAAGTCCTGCTTCTTGCTTGGGGGTATGACAATCTTGTCATTCGGTTGATAGGGCTAACCGTTTTTGCCTTTGCAACTGCCTTTATACTACTAATGATGGAGAGTCTTAGTGCTTTTCTTCATGCCCTGAGGCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTCAGGCCTTTTTCATTTGCCTCCTTAACAGAGGATGACGATTGA 2469 0.4079 MEKMEQFIDNLPPMDLMRSEKMTFVQLIIPVESAHRAISYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQISKAGLMSSSRTVLQPDIDLEDLEIQLAEHEHELIEMNSNSDKLQQSYNELQEFKIVLQKACGFLVSKHSLAVSDERELQENVYSNDAYVETGSLLEQEMRPQSSNSSGLRFISGIICKSKVLRFERMLFRATRGNMLFNQAPDDELIMDPVSAEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKQREITREVSSRLTDLEATLEAGIRHRNKALASVADHLAKWINMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPLFAKTQMQEVLQRATFDSNSQVGIIFHPMDAVESPPTYFRTNTFTNPYQEIVDAYGVARYQEANPAVYTTIIFPFLFALMFGDWGHGICLLLGALVLIARQNKLSTQKLGSFMEMLFGGRYVLLLMALFSIYCGLIYNEFFSVPFHIFGASAYKCRDSSCRDAHTIGLIKYQDPYPFGVDPSWRGSRSELSFLNSLKMKMSILFGVAHMNLGIILSYFNAHFFQNSLDIRYQFVPQMIFLNSLFGYLSVLIVIKWCTGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLAVIAVPWMLFPKPFILKKLHTERFQGRSYGILNTSEVDLEAEPDSARQHHEEFNFSEVFVHQMIHAIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLIGLTVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFASLTEDDD* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0387 822 Pfam V-type ATPase 116kDa subunit family 40 814 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gso15g0387 822 Coils Coil 103 130 - -
Gso15g0387 822 PANTHER VACUOLAR PROTON ATPASES 8 822 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gso15g0387 822 PIRSF ATP6V0A1 12 822 IPR026028 GO:0000220|GO:0046961
Gso15g0387 822 PANTHER VACUOLAR PROTON ATPASE A1 8 822 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0387 Gso-Chr15 3553200 3564050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0387 4 815 Primary Pumps ATPases(2) AT2G28520 80.736 0.0 1365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0387 K02154 - gmx:100793301 1623.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0387 15 3553200 3564050 Gso11g3413 11 50032055 50045869 GST
Gso15g0387 15 3553200 3564050 Gso12g0597 12 5399907 5412990 PCT
Gso15g0387 15 3553200 3564050 Gso11g1246 11 11464325 11475299 PCT
Gso12g0597 12 5399907 5412990 Gso15g0387 15 3553200 3564050 PCT
Gso11g1246 11 11464325 11475299 Gso15g0387 15 3553200 3564050 PCT