Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0382 ATGGGTTGCTTTCGTTGCACAGGCAAATCAAGCAAAAAAACCAACAACAATAACATTAATCACGCCGAGAAGCACACCAATCACAACGAGAAACATACTGCTGCTGATAAGGTCAAAGTTGATTTGAATGTGAATGGTAAACAAGAAGATAATAATCCTAAGCCTGATCAGCTATCTCTGGACGTGGAGAATTTGAATTTAAAAGAGGTTTCCAATGAAGGAAAAGTTAACAGTTACCGGGCACAGACATTTACTTTTGCTGAGCTTGCAGCTGCAACAGGGAATTTCAGGTCAGATTGCTTTCTGGGTGAAGGAGGGTTTGGCAAGGTTTATAAGGGGCGCATAGAGAAAATAAACCAGGTTGTAGCAATAAAGCAACTAGATCCTCATGGGCTTCAAGGAATTAGGGAATTTGTTGTTGAAGTGTTGACATTGAGTTTGGCAGACCACCCTAATTTGGTCAAGTTAATTGGTTTTTGTGCTGAGGGAGAGCAGAGGCTATTGGTTTACGAATATATGCCATTGGGATCTTTGGAGAATCATTTGCACGATCTTCCGCGTGGTAGAAAACCGATTGACTGGAATACAAGAATGAAAATAGCAGCTGGTGCAGCTAGAGGCTTAGAGTATTTGCATAATAAAATGAAACCTCCTGTCATATATCGGGACCTGAAATGCTCCAATATCCTGTTAGGCGAAGGATATCATTCCAAGTTATCTGATTTTGGCTTGGCGAAAGTAGGACCAAGTGGTGATAAAACCCATGTTTCAACCAGAGTTATGGGAACATATGGATATTGTGCCCCAGATTATGCAATGACGGGTCAATTGACGTTCAAGTCTGATATTTATAGCTTTGGAGTTGTTCTTTTGGAGATCATCACAGGCAGGAAGGCGATCGACAATACAAAACCTGCTAAAGAACAAAATCTAGTTGCATGGGCAAAGCCTTTATTCAAAAACCGTAAAAGATTCTGTGAGATGGTTGATCCATTGCTTGAAGGTCAGTATCCAATAAGAGGTTTGTACCAAGCTCTTGCTATTGCTGCCATGTGTGTTCAAGAACAGCCTAATATGCGGCCCGAAACAACTGATGTGGTTACAGCTCTAAATTACCTTGCATCCCAGAAATACGATCCCCAAGTTCATTCAATACAAAGCTGTAGAAAAGGTTTATCTTCTCCAAGAGAAAGAAGCAATGGTCATAGACGCACTGTCAGTAACGATTCTGATCCAAGAGCAAGAAGCCATGATCATAGACGAATTGTTTGTAATGGTTCTGAGACAAGAGCAAGAAGCGAAGGTCGTCATAGACGAACTGTTAGTATTGGTAATGGTCATAGTAGTGGTTCTGAGACAGAAAGCTCTCGAAAAGGTGTAGCTTCTCCAAGGGTGAGAAGTGATGGTCATAGACATTTTGTTAGTAATGGTTCTGAGACAGACAGTTCTGGAGATTAG 1458 0.4115 MGCFRCTGKSSKKTNNNNINHAEKHTNHNEKHTAADKVKVDLNVNGKQEDNNPKPDQLSLDVENLNLKEVSNEGKVNSYRAQTFTFAELAAATGNFRSDCFLGEGGFGKVYKGRIEKINQVVAIKQLDPHGLQGIREFVVEVLTLSLADHPNLVKLIGFCAEGEQRLLVYEYMPLGSLENHLHDLPRGRKPIDWNTRMKIAAGAARGLEYLHNKMKPPVIYRDLKCSNILLGEGYHSKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLEIITGRKAIDNTKPAKEQNLVAWAKPLFKNRKRFCEMVDPLLEGQYPIRGLYQALAIAAMCVQEQPNMRPETTDVVTALNYLASQKYDPQVHSIQSCRKGLSSPRERSNGHRRTVSNDSDPRARSHDHRRIVCNGSETRARSEGRHRRTVSIGNGHSSGSETESSRKGVASPRVRSDGHRHFVSNGSETDSSGD* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0382 485 MobiDBLite consensus disorder prediction 395 441 - -
Gso15g0382 485 CDD STKc_IRAK 102 371 - -
Gso15g0382 485 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL5-RELATED 1 405 - -
Gso15g0382 485 Pfam Protein tyrosine and serine/threonine kinase 101 368 IPR001245 GO:0004672|GO:0006468
Gso15g0382 485 PIRSF TyrPK_CSF1-R 97 188 - -
Gso15g0382 485 PIRSF TyrPK_CSF1-R 187 442 - -
Gso15g0382 485 PIRSF TyrPK_CSF1-R 4 82 - -
Gso15g0382 485 PANTHER OS07G0668900 PROTEIN 1 405 - -
Gso15g0382 485 Gene3D Transferase(Phosphotransferase) domain 1 173 391 - -
Gso15g0382 485 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Gso15g0382 485 MobiDBLite consensus disorder prediction 459 475 - -
Gso15g0382 485 SMART serkin_6 96 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0382 485 MobiDBLite consensus disorder prediction 384 485 - -
Gso15g0382 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Gso15g0382 485 MobiDBLite consensus disorder prediction 8 22 - -
Gso15g0382 485 MobiDBLite consensus disorder prediction 442 458 - -
Gso15g0382 485 SUPERFAMILY Protein kinase-like (PK-like) 82 390 IPR011009 -
Gso15g0382 485 Gene3D Phosphorylase Kinase; domain 1 66 172 - -
Gso15g0382 485 MobiDBLite consensus disorder prediction 1 34 - -
Gso15g0382 485 ProSiteProfiles Protein kinase domain profile. 96 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0382 Gso-Chr15 3449465 3453165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0382 1 375 Glycoside Hydrolase AT3G07070 56.267 4.29e-146 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gso15g0382 PK_Tyr_Ser-Thr 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0382 - - gmx:100794680 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0382 15 3449465 3453165 Gso11g3420 11 50145133 50148902 GST
Gso15g0382 15 3449465 3453165 Gso12g0605 12 5568127 5572595 PCT
Gso15g0382 15 3449465 3453165 Gso11g1238 11 11271725 11276405 PCT
Gso12g0605 12 5568127 5572595 Gso15g0382 15 3449465 3453165 PCT
Gso11g1238 11 11271725 11276405 Gso15g0382 15 3449465 3453165 PCT