Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0375 ATGACTGATTGGAGAAATATTGGTTTCTTTATATGTGTTTTATCAATCTTTCCGCTTGTATGCTTCTGTGCCACCTTTGTTCCAGTAGATAATTATCTTATAGACTGTGGAGCAACTACGAGTACTTCAGTAGGTACACGCAATTTCATAGCAGATAACAAGGATCTCCTTTCCACACAAAAAGATATTGTTGCCACTACCTCCTCAAAATCAGCTACTTCTTCCTCTGATGATTCATCGCTCTATCAAACTGCAAGAGTCTTCACTGCTTCCTCGAAGTACACTTTTAAAATTAATCAAAAGGGGAGGCACTGGATCCGTCTCTATTTCCTTCCATTCGCTTATGAAAAGTACAATTTGCGTGCTGCAGATTTCACTGTTTCCACCCAAAACCATGTCCTTTTCAGAAGCCTCAACATGCAGAAAGATCCTGTGATGAAGGAGTACTCAGTGAATGTGACCTCCGACTCCCTTGTTCTTACCTTTGCCCCTTCAGGAAGTTCCATTGCTTTTGTGAATGCCATTGAAGTTGTTTCTGTCCCTGATGACCTAATTGTTGATGATGGTTTTGCCTTAGATCCATCAGTAACCTCTTCTGGGTTGGTGACACAAGCACTTGAGACAGTTTGGAGGGTTAACATGGGTGGTCCTACTGTGACCCCTATAAATGACACCCTTCAAAGAACTTGGGTTCCTGATCAAAGTTTCCTTTTGCAATCCAACCTTGCCTCATTTTCTTCCAATATTAAGGGTGTTAAGTATGAGAACCATGGGCAAGCAACAGAAAACACTGCTCCGCCTACCGTTTATGGGACTCTCACACAGATGAACTCGACCTATGATCCCCGTAATATTTTCAATGTAACATGGCAGTTTGATGTAAGTCCCGGATTTCAGTACCTTGTTCGACTTCACTTCTGTGATGTAGTCAGTAAAGCTCTCAATGAACTCTACTTCAATGCTTATGTTGACTCCAAACTGGCTGCTTCAAGTGCTGATCCCAGTACTACTAGCAATAATGCTTTGGGTGTTCCATACTATAGGGATCTGGTTACAGCCGTGGCTGTCAGCAAAACACTTCGCGTAAGTATTGGCCCTTCTGAGGTAAATAAGGAGTACCCTAATGCCATTTTGAATGGGTTGGAGATCATGAAAATGAACAATTCTATGGGCAGTCTTATCCCAGGAGCTGTGGCTATTACTTCTGGCTCAAGTTCTAAAAAAACTGGCATGATTGTGGGTGTGAGTGTTGGGGTAGTTGGTGCAGTTGTCTTGGCTGGAGTTTTCTTTGTACTGTGCAGGAAAAGAAGAAGGTTGGCACAAAGGCAGTCAAAGACATGGGTTCCTTTATCCATCAATGATGGAACTACTTTTCATACCATGGGAAGTAAATATTCTAACGGCACAACACTGAGTGCTGCTTCAAACTTTGAGTACCGAGTCCCTTTTGTGGCGGTTCAGGAGGCTACAAATAATTTTGATGAGAGTTGGGTTATTGGCATTGGTGGTTTTGGTAAAGTGTACAAGGGAGAGTTAAGTGATGGCACAAAAGTGGCAGTCAAGAGGGGGAATCCACGATCACAGCAGGGGCTTGCAGAGTTCCAAACTGAAATTGAAATGCTTTCTCAATTCCGTCATCGCCATCTAGTGTCTTTGATTGGTTATTGTGATGAAAGGAATGAAATGATCTTGATATATGAATATATGGAGAAGGGTACTCTCAAGGGTCATTTATATGGTTCAGGTCTGCCAAGCTTAAGCTGGAAGGAGAGGCTTGAGATATGCATTGGAGCAGCTAGAGGGCTTCATTACCTTCACACTGGCTATGCTAAAGCAGTTATTCACCGCGATGTGAAGTCTGCAAATATCCTACTTGATGAGAACCTGATGGCTAAAGTTGCTGATTTTGGATTATCAAAGACGGGGCCTGAAATTGACCAGACACATGTTAGCACAGCTGTTAAAGGTAGTTTTGGGTACCTTGATCCGGAGTATTTTAGGAGGCAACAACTAACAGAAAAGTCAGATGTATATTCATTTGGGGTAGTTCTGTTTGAAGTTCTTTGTGCAAGGCCTGTCATAGATCCAACACTTCCTAGAGAAATGGTAAACTTGGCAGAATGGGCGATGAAATGGCAGAAGAAAGGACAGTTGGAGCAAATCATAGATCAAACACTTGCAGGCAAAATAAGACCAGATTCTCTAAGGAAGTTTGGAGAAACTGCTGAGAAATGCTTGGCTGACTATGGTGTGGACAGGTCTTCTATGGGAGATGTCTTGTGGAATTTGGAGTATGCTCTCCAACTTCAAGAGGCCGTGGTTCAAGGTGATCCTGAAGAAAACAGCACCAATATGATTGGAGAACTCTCTCCACAAGTCAATAATTTCAACCAGGATGCAAGTGCTTCTGTTACACAATTTGCTGGCTCAAGCCTCGATGATCTGTCTGGTGTTTCTATGAGTAGGGTGTTCTCACAGTTGGTGAAGTCTGAGGGTAGATAG 2502 0.4269 MTDWRNIGFFICVLSIFPLVCFCATFVPVDNYLIDCGATTSTSVGTRNFIADNKDLLSTQKDIVATTSSKSATSSSDDSSLYQTARVFTASSKYTFKINQKGRHWIRLYFLPFAYEKYNLRAADFTVSTQNHVLFRSLNMQKDPVMKEYSVNVTSDSLVLTFAPSGSSIAFVNAIEVVSVPDDLIVDDGFALDPSVTSSGLVTQALETVWRVNMGGPTVTPINDTLQRTWVPDQSFLLQSNLASFSSNIKGVKYENHGQATENTAPPTVYGTLTQMNSTYDPRNIFNVTWQFDVSPGFQYLVRLHFCDVVSKALNELYFNAYVDSKLAASSADPSTTSNNALGVPYYRDLVTAVAVSKTLRVSIGPSEVNKEYPNAILNGLEIMKMNNSMGSLIPGAVAITSGSSSKKTGMIVGVSVGVVGAVVLAGVFFVLCRKRRRLAQRQSKTWVPLSINDGTTFHTMGSKYSNGTTLSAASNFEYRVPFVAVQEATNNFDESWVIGIGGFGKVYKGELSDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEKGTLKGHLYGSGLPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNLAEWAMKWQKKGQLEQIIDQTLAGKIRPDSLRKFGETAEKCLADYGVDRSSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQVNNFNQDASASVTQFAGSSLDDLSGVSMSRVFSQLVKSEGR* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0375 833 Gene3D Phosphorylase Kinase; domain 1 456 568 - -
Gso15g0375 833 Gene3D - 204 388 - -
Gso15g0375 833 Gene3D - 31 181 - -
Gso15g0375 833 Pfam Malectin-like domain 34 386 IPR024788 -
Gso15g0375 833 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 18 812 - -
Gso15g0375 833 PIRSF SRK 362 810 IPR024171 GO:0004674
Gso15g0375 833 PIRSF SRK 40 177 IPR024171 GO:0004674
Gso15g0375 833 PANTHER OS07G0166700 PROTEIN 18 812 IPR045272 GO:0004714|GO:0006468
Gso15g0375 833 ProSiteProfiles Protein kinase domain profile. 493 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0375 833 Pfam Protein tyrosine and serine/threonine kinase 498 692 IPR001245 GO:0004672|GO:0006468
Gso15g0375 833 Gene3D Transferase(Phosphotransferase) domain 1 569 786 - -
Gso15g0375 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Gso15g0375 833 CDD STKc_IRAK 499 764 - -
Gso15g0375 833 SUPERFAMILY Protein kinase-like (PK-like) 470 764 IPR011009 -
Gso15g0375 833 SMART serkin_6 493 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0375 833 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0375 Gso-Chr15 3385050 3388633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0375 10 833 Receptor kinase-like Gene Family AT3G46290 66.307 0.0 1090
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso15g0375 Malectin_like 1e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0375 - - gmx:100305416 1619.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0375 15 3385050 3388633 Gso11g3429 11 50240706 50244519 GST
Gso15g0375 15 3385050 3388633 Gso12g0611 12 5661138 5665021 PCT
Gso15g0375 15 3385050 3388633 Gso11g1230 11 11182170 11185379 PCT
Gso12g0611 12 5661138 5665021 Gso15g0375 15 3385050 3388633 PCT
Gso11g1230 11 11182170 11185379 Gso15g0375 15 3385050 3388633 PCT