LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso15g0371	ATGCCGAAAATGGGACTCAAAAACCTGTTCTTCTTCAAAACATCACCTTCGCCACCTTCCTCTTCTCCCACAAGAACCTTCTCCGATTCACTAATGGACCAAAACATCGAAACCGCTCGCGCCATCATTTCCAAATGGGAACTTATTTCCCCTTCTGACCAAGCCGCCCCTCTATTCAGCAACACACGCCAAGAAGCCAAACAGTACCTTAACGCTGTCATGAGCCTGCAGTCCACTATGCAGCACCTCGTCGCACTGGATTCCTCCTCCGACACCCTCATCCAAGCCCACTTCCTTATGCAACTCGCCATGAAGAGACTCCAGACCGAGTTCTATCGGATATTAACCCAAAACAGAGACAATCTCGATCCTGAATCTGTCGCCTCCACCGATCACCGGAGCAGCAGCGTCTCCGACGACGGCACCGATTTCTCCGACGACGAGTTCCGCTTTGCCGGTGACTCGGTCTCCACGGTTGCCATGGCGGACTTGAAAGCCATTGCGGAGTGTATGGTTTCCGCCGGCTACAGCAAAGAGTGCGTCAAGATTTACATCTTAATGAGAAAGTCCATGGTGGATGAGGCACTGTACCATTTCGGAGTGGAGAGGCTCACTTTCTCTCAGATTCAGAAGATGGACTGGGAGGTGCTCGAGTCGAAGATTAAGTCCTGGCTCAACGCTGTCAGGTTCGCCGTCCGCACTCTGTTTCACGGCGAGAAAACGCTCTGTGACTACGTCTTCGGTTCGCCGGAGAGGAAGATCGCGGAGTCATGTTTCGCCGCGGTTTGCAGAGAAGGAGCGGAGTCGCTGTTCGCATTCCCGGAAAAAGTTGCCAAGTGCAAGAAAACGCCGGAGAAAATGTTCAGGACGCTGGATTTGTACGAAGCGATCTCCGACAACCGGCAACAAATCGAGTCCATCTTCTCGTCGGAATCAACCTCCTGCATCAGATCTCAAGTCACTGTTTCTCAGGCGAGGCTCGGCGAGGCGGCACGGACGATGCTAATCAACTTCGAATCCGCGATTCAGAAGGAATCTTCTAAGATTCCCCTGCCTGGCGGCGGGATCCACCCGGTCACGCGCTACGTAATGAACTACATCGCGTTCCTCGCAGATTACGGCGACGCACTCGCCGAGATTGTCGCCGATTGGCCTCAAAATTCGTTGCCGGAGTCTTATTACCGCAGTCCGGATCGCGAGGGAAAGAATCGCTCATCGGAGATAGCTGAACGGATGGCGTGGCTGATATTAGTGCTCCTCTGCAAGCTCGACGGAAAAGCTGAACTCTACAAGGAGGTTGCACTCTCTTACCTGTTCCTGGCAAATAACATGCAATACGTCGTCGTAAAGGTCCGCAACTCAAACCTAGGGTTCATCCTCGGGGAGGATTGGTTGACGAAGCACGAACTGAAGGTGAAAGAGTACGTTTCCAAGTACGAGCACGTGGGATGGAACAAGGTTTTTCTGTCGCTGCCGGAAACTCCGACGGCGGAGCAAGCTAGGGCGATCTTGGAGTGTTTCGACGTCGCATTCCATGATGCGTGCAAGGCACAGTTTTCGTGGGTAGTACCCGACCCGAAACTGCGAGAGGAAATAAAAGCTTCAATAGCTTCGAAATTCGTTCCAAGTCATAGGGAACTCTTTGAGAAGTATCAGGTCGGGTCAGAAACCGTGTTCGGGCTTACACCCGATGATTTGGAGCATAGTCTTTCTGACATTTTATCGGGTAGCGTTTCGTCGTCGCATTCTCCTTCACCTCCACATCGCTTCAAACGCCCGTGA	1782	0.5247	MPKMGLKNLFFFKTSPSPPSSSPTRTFSDSLMDQNIETARAIISKWELISPSDQAAPLFSNTRQEAKQYLNAVMSLQSTMQHLVALDSSSDTLIQAHFLMQLAMKRLQTEFYRILTQNRDNLDPESVASTDHRSSSVSDDGTDFSDDEFRFAGDSVSTVAMADLKAIAECMVSAGYSKECVKIYILMRKSMVDEALYHFGVERLTFSQIQKMDWEVLESKIKSWLNAVRFAVRTLFHGEKTLCDYVFGSPERKIAESCFAAVCREGAESLFAFPEKVAKCKKTPEKMFRTLDLYEAISDNRQQIESIFSSESTSCIRSQVTVSQARLGEAARTMLINFESAIQKESSKIPLPGGGIHPVTRYVMNYIAFLADYGDALAEIVADWPQNSLPESYYRSPDREGKNRSSEIAERMAWLILVLLCKLDGKAELYKEVALSYLFLANNMQYVVVKVRNSNLGFILGEDWLTKHELKVKEYVSKYEHVGWNKVFLSLPETPTAEQARAILECFDVAFHDACKAQFSWVVPDPKLREEIKASIASKFVPSHRELFEKYQVGSETVFGLTPDDLEHSLSDILSGSVSSSHSPSPPHRFKRP*	594

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso15g0371	593	SUPERFAMILY	Cullin repeat-like	59	572	IPR016159	-
	Gso15g0371	593	Pfam	Exo70 exocyst complex subunit	222	571	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Gso15g0371	593	Gene3D	Exocyst complex component Exo70	40	583	-	-
	Gso15g0371	593	MobiDBLite	consensus disorder prediction	574	593	-	-
	Gso15g0371	593	PANTHER	EXOCYST SUBUNIT EXO70 FAMILY PROTEIN	4	581	-	-
	Gso15g0371	593	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	4	581	IPR004140	GO:0000145\|GO:0006887

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso15g0371	Gso-Chr15	3335708	3337830	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso15g0371	11	577	EXO70 exocyst subunit family	AT5G59730	47.324	1.54e-179	520

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso15g0371	K07195		-	gmx:100801773	1111.29

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