Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0370 ATGGCGAGAATCAAGGTGTACGAGCTGAGGTACAAGACAAAAGCAGAGCTTCTGAACCAACTGAAGGATCTCAAAGCAGAACTCGCTCTCCTCCGCGTCGCTAAGGTCACCGGCGGAGCCCCAAACAAGCTTTCCAAAATCAAAGTGGTTCGGCTTTCGATAGCGCGGGTGCTGACAGTGATTTCCCAGAAGCAAAAGGCAGCGTTGAGGGAAGCTTACAAGAAGAAGAAATACCTTCCTTTGGATCTGCGTCCCAAGAAGACCAGAGCCATCAGAAGGCGCTTAACTAAGCACCAGGCTTCATTGAAGACACAGCGTGAGAAAAAGAAGGAATTGTATTTTCCAATGCGAAAATATGCAATTAAAGTGTAA 372 0.4731 MARIKVYELRYKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIARVLTVISQKQKAALREAYKKKKYLPLDLRPKKTRAIRRRLTKHQASLKTQREKKKELYFPMRKYAIKV* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0370 123 PANTHER 60S RIBOSOMAL PROTEIN L35 1 123 IPR045059 GO:0000463|GO:0022625
Gso15g0370 123 TIGRFAM L29: ribosomal protein uL29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gso15g0370 123 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 1 123 - -
Gso15g0370 123 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gso15g0370 123 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
Gso15g0370 123 Gene3D - 78 123 - -
Gso15g0370 123 Coils Coil 14 34 - -
Gso15g0370 123 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gso15g0370 123 CDD Ribosomal_L29_HIP 8 64 - -
Gso15g0370 123 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0370 Gso-Chr15 3321388 3323037 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0370 1 123 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 86.992 6.25e-71 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0370 K02918 - gmx:100798230 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0370 15 3321388 3323037 Gso11g3435 11 50314862 50316628 GST