Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0361 ATGCACTTCGAGGAAAAAGGAAGTGTTGATGCTACAAGAAAAGTTTACGACTTAACTCTTTTAACGAAGAAGGAATACATGAAAATAATTAAGCTGACAAACAATGGTTCAGCAACACCATCAGAGTTAGTGGCAGCATCACTGTCACATGCCTTTGCACTTTTTGTTGCGGTCTCTGTAGGTGCAAACATTTCTGGTGGTCATGTAAACCCTGCTATCACTTTCGGTGCCTTTGTTGGTGGCCACATTACTCTCTTTAGAAGCATTTTGTACTGGATTGCTCAGTTACTAGGCTCTGTCGTTGCTTGCTTGCTCCTTAAATTTGCCACTGGTGGACTGGAAACATCAGCATTTGCACTGTCTCCTGGGGTGGAAGCAGGGAACGCTCTAGTGTTCGAGATTGTGATGACTTTTGGTTTGGTTTACACGGTGTATGCAACTGCAGTGGACCCAAAGAAGGGTGACCTTGGGATAATTCCTCCAATTGCAATTGGTTTCATCGTTGGTGCGAACATCTTGGCGGGGGGTACATTTGACGGTTCATCTTGTCAGTTGGACTTGGGCTAA 567 0.4462 MHFEEKGSVDATRKVYDLTLLTKKEYMKIIKLTNNGSATPSELVAASLSHAFALFVAVSVGANISGGHVNPAITFGAFVGGHITLFRSILYWIAQLLGSVVACLLLKFATGGLETSAFALSPGVEAGNALVFEIVMTFGLVYTVYATAVDPKKGDLGIIPPIAIGFIVGANILAGGTFDGSSCQLDLG* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0361 188 Gene3D Glycerol uptake facilitator protein. 23 185 IPR023271 -
Gso15g0361 188 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 22 183 - -
Gso15g0361 188 ProSitePatterns MIP family signature. 68 76 IPR022357 -
Gso15g0361 188 PRINTS Major intrinsic protein family signature 50 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso15g0361 188 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso15g0361 188 PRINTS Major intrinsic protein family signature 132 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso15g0361 188 PRINTS Major intrinsic protein family signature 165 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso15g0361 188 SUPERFAMILY Aquaporin-like 32 181 IPR023271 -
Gso15g0361 188 Pfam Major intrinsic protein 33 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso15g0361 188 PANTHER AQUAPORIN-8 22 183 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0361 Gso-Chr15 3246963 3248495 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0361 31 184 Major Intrinsic Protein MIP AT4G01470 79.870 1.10e-82 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0361 K09873 - gmx:547794 286.96