Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0340 ATGGGAAAGGACTTGGTTTCTTCTGACCAGACTACTGTTCAAATTCAGGACAATAATCCAGGATGCATGTGGGGAATGCTTCAAATTCTTGATTACCATCGTTGGCGCGTAAAAAAGGTGTTCCCTCACAAAAGGAGAAGACATGCCACATATAAGAGAAAACCCATTTTGTATAACCAACATGAAGATCAACAACATGGAGTTACAGAAGCAGAACCCCTCCTTGTCGGGCAACCTAGCAAAAAATTGCATGCTGCAGGCAAAAGTTCTCCCAAAAATCGCAAAAAGGAACCACGCACTGAGAAAGAGTTTAACAACGAAAACTCCAAAGGCAACAGTAGCATGGACTACTCAAAGAAAAACCAAGCCAGTAGAGAGTATGCACTTCATCTGGAGAAAGATGGCAAGACAACAGAAGCTGCCCTTAACCATAAGCCTATGGAAACAAACAAGCATAATAGAGACATTTCCAATAAATTTGAGAAACATACTGATGTTTTTGAGTTGCTTAGAGTAGAGAAAGATTTATTACTCAAATTTCTACGAGACATAGACTTTGGTGGAAAAAAAGTCCAACAAGCTTCCCACATCAATGCAAGATTGAAAAAATCTGGGTCATTTCCTTTGGCCTCAACTTCACAGATGAGAAACATAAGCTCTAGGTCCTTAAAACACAAGCAAAACGAAATTTGGGCCTTTCCAAAGGGAGAAAAACTGCATGCTGGTACTCAAGAATCAAACATGTTGGTGTCCAGTTCTGTGAAAGATACTTCTTATGAGAAGTCAATGCCTTTAGCGAGTGATCTTGGTGTGGATAGTGCCATGAAACAAAAAGCAATCATTTCTTCAGGGCCTTCTCAGGGATCAAATCACAAAGGGTGGAATCAAGTGGTTCTTCATCAATTCAAAGTTATAAAACAGAAGATAAAATATGTTCTTGTGGAATTCAGAAAAAGCGGTTACCAAACTACTTCTGCTGAAGCCATCCATCGCAGAGCTTCACCTGAATATAGCATCATAAAAAATGAGGAAGAGATCTCACAAAGCTTAGAAGATGGTGTGGTTCAACAATTCAAAAGGAGTAAAAGCTCAAATGAAACTAGAGCTTCTGATTATGATTCCAACAAGCATGATGCTCGCCTCATGCGAAGAACATCCTCTCTGAATGAATCATTGGATAGATATACTCAGTTGTTTGAGAAAAGCTTCAGCAAAGACACTAAGTGGCAAAGCTCAAAGTCTAAAAGCTTAAAATTGACAAACGAGGATAAGAACCACAAGAATGGGCACGCTCCTAGGTTTTCAAGAAGCAACTTGTCTATGCCTAATCTCGAGACTTTAAGCTTCATTCTACAAGATGCACTTTTTGATACAAATGATATAGGGACTACAGTGGAAGCTTATAATCGTGTTCATAGAAAATCAGTGAGTCTTCCTTTGAAGATAGACAAGTCACTTGATCATTTTAAAGAGGCTGAGATTGTGGAAACAGTAGAAGGGAGTAACAGAGATGTTAATCCCAGTCTTTTATCAGATATGATTATGGAGAAAATTGAAGAAATTGATGAAGAAGTTACCTGTGACCAGAAGGAGGAAATGCATGAGCCAGCAGTGGGAGATGGAAGTTTTCCCCAGGAAAAAGAGGAAATGAATAATATGACTACCAATCTTAGCAAGGAGGTGATGGCAACTCTTGGAACTAGCTTTGAGGACAATAAAACTGGAAATGCAGAAGGCACAGAATTGAATTCACTAGGCTCTACATTGGACGAATTGGAGACTGATTTATCATATAAAGGAAATGTATATCATTCTTTGCCAGACTCTTCATCCGACAGAAATGCTAGTGTGACAGCCGAAGACACAGACAACACTTCCAATTTCAAATATGTGAAAAATGTTCTTGAATTTTCGGGCTTCTTGGGAAATGAGCACACTCAGAAGCGATACACAGTAGACCAGCCACTGAAGCCCTCCATATTCCAAGATTTGGATGCGACTTTGTGCCATGAAATTGAACCCTCTGAAGAGACAATCAGCCACCAGCTTCTTTTTAACTTAGTTAATGAGGTGCTGCTTGAAATATATGGAAGGTCTCCAACTTACTTCCCAAGACCATTCTCATTCAACCCCCGCTTCCATCCAATGCCTAAAGGGAACTATCTTCTGGATGAAGTATGGAATAGTGTTAATTCATACCTGACCTTGAGACCTGAGTTAGATCAGACACTAGAAGATGTCATCGGTCGAGATTTGGCAAAAGGAAAAGGCTGGATGATACTTCAAGAGGAAGAGGAGTATGTAGCACTTGAACTAGAGGAGATGATCATGGATGATTTGTTAGATGAATTCATCTTCTCATGA 2364 0.3964 MGKDLVSSDQTTVQIQDNNPGCMWGMLQILDYHRWRVKKVFPHKRRRHATYKRKPILYNQHEDQQHGVTEAEPLLVGQPSKKLHAAGKSSPKNRKKEPRTEKEFNNENSKGNSSMDYSKKNQASREYALHLEKDGKTTEAALNHKPMETNKHNRDISNKFEKHTDVFELLRVEKDLLLKFLRDIDFGGKKVQQASHINARLKKSGSFPLASTSQMRNISSRSLKHKQNEIWAFPKGEKLHAGTQESNMLVSSSVKDTSYEKSMPLASDLGVDSAMKQKAIISSGPSQGSNHKGWNQVVLHQFKVIKQKIKYVLVEFRKSGYQTTSAEAIHRRASPEYSIIKNEEEISQSLEDGVVQQFKRSKSSNETRASDYDSNKHDARLMRRTSSLNESLDRYTQLFEKSFSKDTKWQSSKSKSLKLTNEDKNHKNGHAPRFSRSNLSMPNLETLSFILQDALFDTNDIGTTVEAYNRVHRKSVSLPLKIDKSLDHFKEAEIVETVEGSNRDVNPSLLSDMIMEKIEEIDEEVTCDQKEEMHEPAVGDGSFPQEKEEMNNMTTNLSKEVMATLGTSFEDNKTGNAEGTELNSLGSTLDELETDLSYKGNVYHSLPDSSSDRNASVTAEDTDNTSNFKYVKNVLEFSGFLGNEHTQKRYTVDQPLKPSIFQDLDATLCHEIEPSEETISHQLLFNLVNEVLLEIYGRSPTYFPRPFSFNPRFHPMPKGNYLLDEVWNSVNSYLTLRPELDQTLEDVIGRDLAKGKGWMILQEEEEYVALELEEMIMDDLLDEFIFS* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0340 787 MobiDBLite consensus disorder prediction 355 383 - -
Gso15g0340 787 MobiDBLite consensus disorder prediction 414 430 - -
Gso15g0340 787 MobiDBLite consensus disorder prediction 107 121 - -
Gso15g0340 787 MobiDBLite consensus disorder prediction 364 383 - -
Gso15g0340 787 MobiDBLite consensus disorder prediction 78 122 - -
Gso15g0340 787 Pfam Domain of unknown function (DUF4378) 628 783 IPR025486 -
Gso15g0340 787 MobiDBLite consensus disorder prediction 90 106 - -
Gso15g0340 787 MobiDBLite consensus disorder prediction 414 437 - -
Gso15g0340 787 PANTHER PROTEIN TRM32 1 787 IPR044257 -
Gso15g0340 787 PANTHER PROTEIN TRM32 1 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0340 Gso-Chr15 3046466 3051544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0340 620 785 TRM (TON1 Recruiting Motif) Superfamily AT1G07620 42.353 8.84e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0340 - - gmx:100784103 1535.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0340 15 3046466 3051544 Gso11g3469 11 50603231 50608381 GST