Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0328 ATGGATAGAAGAGCAGTCTCCAGCATCAATACTGATCAAGAGTGTCCTTTGGACGACACTGATTCCTCCTCCGCTCTCTTTAGCTACATAAAGCAAATGCTCATGGAAGACGACACCCAGGAGAGTTACAGTATTTTCCATGATTCCTTGGCCCTCCAACACACTGAGAGATCATTTTATCAAGTTATCACTCACAACTACCCTCCTTCATCTTCCTCCCCCCATCATCAGAGTCCTGAGCAAAGTCTCTCCGTTTCCTCAAGTGATTCTAGTAGTAGCTGCAGCACTAACAGTACTAGCAGCTCCGCCGACTCTCCCTTCAGAAGCCTTCCCCCTCTACTTCCACACTCTACTTTTCCTATTCCTCATAACTTTTTTTTCCACTCAAATTCAACCCAATCTTCAATCAATACTACACTTGGATTCTTCGACAATCCCCTCGCTGAAATTTCTGATTCAGCATTTCTACAACAATTTGAGAGAGGTGTAGACCAAGGTACCCGTTTCCTTCCTCTACACACTACTCCATTCAATATTAATGTTGACCCGAACAACACAGCCTTTTCCTCTTCTTTCACAAAGACAAAAACTCCACCTCCGCAGATGCTAATTAAGACAGAAGCAGAAGGAGAGCCTTTTCTGGCAGGAAGGAAACAAAGGCAGCGGGAAGAGTATGAAGCAGATGGAAGAAGCAGGAAGCAATCGGCACCGTACATGGATGACAGTGAGCTATCCGAATTGTTTGATAAAGTACTATTAGGCACTGGCTTAGGAAAAGGGGTACCTCCTGACACAACCCATGAAACAATATTAACGAACATGTTTGATGGAGATGCTAGCAAAAGTGATGAGGAAGTTGTGGATCTTGGGACACTGTTGATGCTATGTGCACAAGCTGTTGCTTCCGGTAGTAGTCCTTCATTTGCTAAGCAGTTAGTGATGCAGATTAAGCAGCATTCTTCTCCAATAGGGGATGAGACTCAGAGGCTAGCACATTACTTTGGAAATGCCCTTGAAGCACGTTTGGATGGAACGGGTTACCAGTTTTATAGTGTTCTTCTATCCTCCAAAAGAACTTCTGCCAAAGACATGGTAAAAGCTTACCATGTATATCTTTCAATATGCCCATTTGAAAAGCTAGCAGTCATTTTTGCCAACAATTCAATTTGCAACCTAAGTGAGGATGCAAAAACAATTCACATCATAGACTTTGGCATCCGCTATGGCTTCAAATGGCCTGCACTTATCAGCCGTCTATCAAGACGCCCTGGTGGGCCACCCAAACTTCGGATCACGGGGATAGATGTGCCACAACCTGGTTTAAGACCACAAGAGAGGGTGCTCGAAACAGGGCGCAGACTTGCAAATTATTGCAAGCGTTTCAATCTTCCATTTGAGTTCCATGCTATTGCACAGAGATGGGACACCATCAGAGTTGAGGACCTCAAGATAGAAACAGACGAATTTGTGGCTGTGAACTGCTTGTTTCAGTTTGAGCATCTACTTGACGAGACCGTGGTGTTGAATAATCCCAGGGATGCTGTTCTGAAGTTGATTAAGAAAGCTAATCCTGACATATTTGTGCATGGCATTGTCAATGGATCATATGATGTACCGTTCTTTGTTTCACGTTTCCGTGAGGCTCTCTATCATTACTCTGCATTGTTTAACATGCTTGACACCAACGTTGGTCGTGAAGACCCCATAAGGTTGATGTATGAGAAGGAGTTGTTTGGACGGGAGATAATGAACATCATAGCTTGTGAAGGTTGTGAGAGGGTTGAGAGGCCTCAGACATACAAGCAATGGCAGCTTCGGAACATGAGAAATGGGTTTAGGCCGCTTCCTCTGGATCAACGAATCATTGACAAATTAAAGGGTAGGTTGAGAGATGATGCGTACAACAATAATTTCTTGCTTGAGGTGGATGGCAACTGGGTGCTACAAGGTTGGAAGGGACGAATTCTATATGCTTCCTCTTGTTGGGTACCGGCATAG 1998 0.4424 MDRRAVSSINTDQECPLDDTDSSSALFSYIKQMLMEDDTQESYSIFHDSLALQHTERSFYQVITHNYPPSSSSPHHQSPEQSLSVSSSDSSSSCSTNSTSSSADSPFRSLPPLLPHSTFPIPHNFFFHSNSTQSSINTTLGFFDNPLAEISDSAFLQQFERGVDQGTRFLPLHTTPFNINVDPNNTAFSSSFTKTKTPPPQMLIKTEAEGEPFLAGRKQRQREEYEADGRSRKQSAPYMDDSELSELFDKVLLGTGLGKGVPPDTTHETILTNMFDGDASKSDEEVVDLGTLLMLCAQAVASGSSPSFAKQLVMQIKQHSSPIGDETQRLAHYFGNALEARLDGTGYQFYSVLLSSKRTSAKDMVKAYHVYLSICPFEKLAVIFANNSICNLSEDAKTIHIIDFGIRYGFKWPALISRLSRRPGGPPKLRITGIDVPQPGLRPQERVLETGRRLANYCKRFNLPFEFHAIAQRWDTIRVEDLKIETDEFVAVNCLFQFEHLLDETVVLNNPRDAVLKLIKKANPDIFVHGIVNGSYDVPFFVSRFREALYHYSALFNMLDTNVGREDPIRLMYEKELFGREIMNIIACEGCERVERPQTYKQWQLRNMRNGFRPLPLDQRIIDKLKGRLRDDAYNNNFLLEVDGNWVLQGWKGRILYASSCWVPA* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0328 665 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 14 664 IPR005202 -
Gso15g0328 665 MobiDBLite consensus disorder prediction 1 20 - -
Gso15g0328 665 MobiDBLite consensus disorder prediction 64 107 - -
Gso15g0328 665 MobiDBLite consensus disorder prediction 64 109 - -
Gso15g0328 665 MobiDBLite consensus disorder prediction 212 239 - -
Gso15g0328 665 ProSiteProfiles GRAS family profile. 280 663 IPR005202 -
Gso15g0328 665 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 14 664 - -
Gso15g0328 665 Pfam GRAS domain family 291 662 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0328 Gso-Chr15 2958002 2960413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0328 26 665 GRAS Transcription Factor Family AT1G07530 46.933 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso15g0328 GRAS 2.2e-108 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0328 - - gmx:100780343 1275.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0328 15 2958002 2960413 Gso11g3481 11 50693637 50696229 GST
Gso15g0328 15 2958002 2960413 Gso12g0513 12 4585233 4588478 PCT
Gso15g0328 15 2958002 2960413 Gso11g1175 11 10554484 10557978 PCT
Gso12g0512 12 4576284 4579092 Gso15g0328 15 2958002 2960413 PCT
Gso11g1174 11 10546910 10549651 Gso15g0328 15 2958002 2960413 PCT