Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0317 ATGAGAGAACAAAGCTTTGGAGATAAAATGCATGGAATAACTCTCCCTCTCACTGCAACTGCAAATAGCTTCCTTTTGAGATCTCCTCTACCAAGTTGTTTCATACCCACTTGTAAAGTTAGCTACGGATTTCGTTTTAACCATTCTCAGTGGAAGCACCATAAAACAGAAGGATGGAGCAATAGGAATAGAACGATGGTGGTGAGAGCAAGGCGTAGCGAGTCACCGTATGATGTTTTGGGAGTGTCTCCATCAGCATCCGTCGACGAAATCAAAAAGGCCTATCGGAAACTTGCTCTTAAGTATCATCCCGATGTTAATAAAGAGGATAAGGCACAGGAGAAGTTTATGAGGATAAAACATGCATACAATACATTGCTAAATTCTAGTTCCCGCAAAAAATATGATTCTGGAAGTCGAGGTTATGATTTTTCTCAAGGAAGCCGAAGTAGGAATGTACAAACTGAAGAAGAATTTTATGGACTAGAGGACTTCTTTAAGGATCTTCAAGAAGAATTCAAGAACTGGGAAGCAAACGCTGCTTCACAAGGAAAGCCAAAGAGTCTATGGGAGGAATTGGCGGAAATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTTAATATTACTGATCAAAATGATGATTATAAAACGTCTCAGGGAGAAAATACATCCAACTTTTCTGGGACGGAGACACCAAGCAATAGCAGTCAAGGTGAAGCTAGCAAGGGAAACAGAAGCGTTGACGATAACATTGAGGAAATAGAAGCTACTCTGGCTCAGTTGAAAAAGGAATTAGGTTTATAG 810 0.4012 MREQSFGDKMHGITLPLTATANSFLLRSPLPSCFIPTCKVSYGFRFNHSQWKHHKTEGWSNRNRTMVVRARRSESPYDVLGVSPSASVDEIKKAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLLNSSSRKKYDSGSRGYDFSQGSRSRNVQTEEEFYGLEDFFKDLQEEFKNWEANAASQGKPKSLWEELAEIGEEFVEFLEKELNITDQNDDYKTSQGENTSNFSGTETPSNSSQGEASKGNRSVDDNIEEIEATLAQLKKELGL* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0317 269 Coils Coil 246 266 - -
Gso15g0317 269 MobiDBLite consensus disorder prediction 211 253 - -
Gso15g0317 269 PRINTS DnaJ domain signature 77 95 IPR001623 -
Gso15g0317 269 PRINTS DnaJ domain signature 95 110 IPR001623 -
Gso15g0317 269 PRINTS DnaJ domain signature 111 131 IPR001623 -
Gso15g0317 269 SUPERFAMILY Chaperone J-domain 26 135 IPR036869 -
Gso15g0317 269 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 47 267 - -
Gso15g0317 269 Pfam DnaJ domain 76 136 IPR001623 -
Gso15g0317 269 Gene3D DnaJ domain 72 182 IPR036869 -
Gso15g0317 269 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 47 267 - -
Gso15g0317 269 SMART dnaj_3 74 131 IPR001623 -
Gso15g0317 269 MobiDBLite consensus disorder prediction 214 246 - -
Gso15g0317 269 ProSitePatterns Nt-dnaJ domain signature. 116 135 IPR018253 -
Gso15g0317 269 ProSiteProfiles dnaJ domain profile. 75 139 IPR001623 -
Gso15g0317 269 CDD DnaJ 76 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0317 Gso-Chr15 2861281 2865167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0317 77 137 C2H2 Transcription Factor Family AT1G74250 41.791 7.40e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0317 - - gmx:100812972 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0317 15 2861281 2865167 Gso11g3488 11 50774332 50777909 GST