Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0290 ATGGAGTCAGATCTCGAGCAGCAGCCGCAGGTGAATTCCTCGGGTTTAACTCGGTACCGATCGGCGCCGAGTTCGTATTTCTCTAACATCATTGACCGCGAGTTCTACGAGCACGTCTTCAACCGTCCCTCGAGTCCCGAAACGGAGCGAGTGTTCTCACGCTTCGTTAACAGCTTAAACAGTGAAGAAGAAGATTCGCTCCACCACAAGCTCTCAACTGATTCTTCTTCTTCTGCTGCGGTTAAGGAAGAGGTTAACCAACAAGACCAGGGTATCAACGAGGAACACGTGGCGGTGGCTGCGCTACAGCAGAGTAATAACAACATCAATAATTACAACAACAACAACAACAACAACTACTCTGCTTCTCATAATTTCTACCAAAGCTCCTCCTCCAAACCTCCCTTGCCGAACCAGAACCCGAACCTTCCCTCAGCTATGGAGCAAGGATCGTTTTCAATGGGACTCAGGCATAGTGGAAATAATTCTAACCTTACCAGGCATAGTAGCTCTCCCGCAGGACTATTTTCCCAAATTAACATTGAAAATGTGTATGCTGGTGTGAGAGGCATGGGGAGTTTGGGAGCTGTTAACAACAGTATCGAAGATGCGAAATTTTCTAGTTCGAGGAGGTTGAAGAATCAACCGAACTATTCTTCGTCGGGGAGAATGTCGTCCATTGCTGAAATTGGGGACAAAGGGTATAGAGAAAGTAGTCCAGACAGTGAAGCTTTTGCTGATGGTAACGATTTTATGGCCGGTTACCAAGTTGGTCATTGGGATGATACTGCAATGATGTCTGACAACGTTGGTGGTCTCAAAAGATTTAGTGAAGAAGATTCAAAACCATTTTCTGGCTTAAATGCGGTTGAGACTCAGAATGAAACGGGACAGACTCATGCTCCTTTGGCCCATCAGTTGAGTTTGCCAAATACTTCAGCTGAAATGGCTGCCATTGAGAAGTTTCTGCAGTTTTCAGATTCTGTTCCGTGCAAAATCCGTGCCAAACGGGGCTGTGCCACTCACCCAAGAAGCATTGCAGAGAGGGTTAGAAGAACTAAAATTAGTGAGCGTATGAGGAAACTTCAGGATCTTGTCCCAAACATGGACAAGACCTTCAAAAGCAAGTTCAGACACTTTCAGATTGTCATGCAAAGTGTACGTGTTCACACGAGAAGCAACAATAACGGAAAAAAAGGGAGATTGGTCGACTTAGCTTGTGTTTCTATATCCCGTTGA 1239 0.4552 MESDLEQQPQVNSSGLTRYRSAPSSYFSNIIDREFYEHVFNRPSSPETERVFSRFVNSLNSEEEDSLHHKLSTDSSSSAAVKEEVNQQDQGINEEHVAVAALQQSNNNINNYNNNNNNNYSASHNFYQSSSSKPPLPNQNPNLPSAMEQGSFSMGLRHSGNNSNLTRHSSSPAGLFSQINIENVYAGVRGMGSLGAVNNSIEDAKFSSSRRLKNQPNYSSSGRMSSIAEIGDKGYRESSPDSEAFADGNDFMAGYQVGHWDDTAMMSDNVGGLKRFSEEDSKPFSGLNAVETQNETGQTHAPLAHQLSLPNTSAEMAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKTFKSKFRHFQIVMQSVRVHTRSNNNGKKGRLVDLACVSISR* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0290 412 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 7 371 - -
Gso15g0290 412 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 371 - -
Gso15g0290 412 MobiDBLite consensus disorder prediction 62 90 - -
Gso15g0290 412 MobiDBLite consensus disorder prediction 72 90 - -
Gso15g0290 412 Gene3D - 342 412 IPR036638 GO:0046983
Gso15g0290 412 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 342 376 IPR036638 GO:0046983
Gso15g0290 412 MobiDBLite consensus disorder prediction 107 149 - -
Gso15g0290 412 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 339 390 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0290 Gso-Chr15 2640242 2643652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0290 7 370 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 37.197 7.18e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0290 - - gmx:100806368 698.353