Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0282 ATGGATTCCCACAAGCTTGCTGTTATTGACAGTTCCTCTGGAAAATACCGAGATGTTAAAGTTGCTGATGATTACGTATCTGTTATGACACTAACATTAGAAATCCAAGAAAAGGTGAAGAATTCTGGTCGTTTTGGGGTTCATGCTCTCAGTGAAGTTGCTTCAGACTTAGCTCCAGATTATCTTGAGCGTCATGGACTTAAATCTGTTCCTAAATCTGTGGCTTATGGTTACACTGCTTCAGGATATGGATTTATTCAAGACATGCCTTATGCTTACATTCATGAATTTACCAGAACTTCCATGGCCGGAAAAATTCGACGATTCAAAGGTGGATATACAAGTCTTTGGCAGAGGATTGCTGAATCACTTCCTATAAAACTTCATTATAACACTGAGGTGTTAGCAATCAGGCGGAACTCTGACAGTGTCACTGTTAATGTCAAGGGTTCAAATGAAATTGAAACTATGGAATATGATAAGATCATAATCTCTGGTAACTTTCCATTAAAGTATGGAAGAACTTATAAATCAGTGCCTTCAACTTGCTTAGAGAATGAAACAGATGTAATGGATGTAAGTGAGCTTGAAAAGGATTTGTTCAGCAAAGTAGAAACAAATGACTACTACACAACAGTTTTAAAGATCAAAGGGCTGGAACATATGCCGGTTGGATTTTATTATTTTGGTGAATATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCCATGCAGAAATTTTATGCCGACAGTAACATATTCTTGTTCTGGTCCTATGGCAACTCTGCTGATATTAAGGGACCGACTGTCACTGAGCTTGCAATCAAATCAATAGAATCCATGGGGGGAGAAGTTGAGAATTTCATTCTTCAACGTCGCTTTAAGTATTTTCCTCATGTTAGCAGCCAAGATATGAGAAACGGATTCTATGAAAAGTTGGAGTCAGAGCTTCAAGGCTCAAGGAATACTTATTATGTTGGTGGACTTATGGCATTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTTTGATCTGCAAGAACTTTGCAAGTAGCAGTGATTTACCAGTGTTTCCTTACACTAAGAGTTTGTTTCCCTTGCAAACTGAGATCCAGAAAAAGGAGCCTAAAGAGCTAGGTGAATTGCCTGGAGTGAAATTTCCCAATTTTCCTGCTTTGAATAGCTATTTAAAGCACTGGGGAACACATCCAGTCACTCAGAACAGAACTCTTTATACTTGGCTAAATGAAGGAGGGACGGTGGTTGACAAGAGGACATATGGAGAACAACATTTAAATGCTTCTTGCATTGCACATAAGCTCTTAACAAGCCAAAAGCCAGTTATCAAGCCTGGTGACAGGGTTCTCCTGGTCTATGTTCCTGGCCTCGATTTTGTTGATGCCTTCTTTGGATGTCTAAGAGCTAAAGTTTTGCCAGTCCCAGTTCTTCCCCCAGACCCCATGCAGAGAGGTGGACAAGCACTTATGAAAATTGAGAACATCACCAAGTCATGCGGCATAGTGGCAATTTTATCAACTGTATCTTATCATTCAGCAGTACGTGTAGGTCTAGTGAAAAGTTTAATCTCATTAACTGGAAAAAATGGGAAATCCACAGCTCAATGGCCAAAACTTCCGTGGCTGCACACCGATACTTGGGTCAATAACTCAAGAAATTCAGCTGTGGAAGATGTAGATGATCAATGTGAATCCCAGCCTGGTGATGTATGTTTCTTGCAGTTTACCTCAGGCTCAACTGGTGATGCTAAAGGAGTCATGATAACGCATGGAGGGCTCATTCACAATGTGAAGTTGATGAGAATTATATACAAGAGCACCTCAAGGACAGTGCTAGTGAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACAGCTCTTGTTAGTGGTGGATCTGCTGTGCTATTTTCACCATTGACATTTATTAAGAAACCACTCTTATGGCTTGAAACCATCAGCAAGTATCAAGCAACTCACAGTGCTGGCCCCAACTTTGCTTTTGAGCTGGTGGTTCGAAGGTTAGAGTCCGAGAAAGACAAGCTTCAGAATTTAGACCTTTCATCCATGATTTTCCTAATGGTTGCTGCTGAGCCGGTGAGGATGAAGACCTTGAACAGATTTCTTGATCTAACCACTCCTTTTGGCTTATCTCAAAAGGTGATGGCTCCAGGATATGGCTTAGCAGAAAATTGTGTGTTTGTGAGTTGTGCATTTGGAGAAGGATATCCTATTCTTGTTGATTGGCAAGGAAGAGTTTGTTGTGGATATATTCACCCAGGTGATGCAGATGTTGACATTGCAATAGTTGATCCAGAGAGTGGTGAAGAGCTTGAGGAAGATGGAAAGGAAGGAGAAATCTGGATAAGTAGTCCAAGTGCAGGAATAGGATACTGGGGAAAGGAAGAACTGAGTCAGAAAACTTTTAGAAATGAGCTTCAGAACCATCCTGGACGCAACTACACAAAAACTGGAGACTTGGGAAGAATTATAGATGGGAAGCTATTCATCACTGGGAGAATCAAGGATCTTATCATTGTGGCTGGAAGAAACATCTACTCAGCAGATGTTGAAAAGACGGTCGAGAGTTCGTCTGAATTTCTTCGTCCCGGTTGCTGTGCAGTCATTAGTGTCCCTGAGGAAATTTTATCAGCAAAGGGGATTTCCTTGCCAGATGGATCTGACCAAGTTGGCTTGGTTGTGGTTGCTGAAGTAAGGGATGGTAAAACAGTTAGCAAAGATGTGATTGAGCATATTCAGACACGTGTGGTTGAAGAACATGGAGTCAGTGTTGCTTCTGTCAAGTTGATCAAGCCTAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGATTTGAGTGTCTCAAACAGTTTTCAGATGAAACACTAAGCTTGGTGCCACAACCTATTTTGACAAAGAAATCACTGGTGAGGTCATTTACTACAGGAACTTGCAGAGAAGGAAGAACACCCCGGGCACATCTGGTGAGAAGTAGTACTCCTCTACCTATTCCAAGAATCAGCAACAAAGAAATAGTGGAACACCTGAAAAGGCTTATTTCTGAGCAGTCTGGAATCCCAGTCAACAATATCTCAGTCACTGACAACATGTCAACCTATGGAATTGATTCAATTGGAGTGGTCAAAGCAACTCAAAAACTCACAGATTTCCTGGGAGTTCCAGTTGCGGCTATAGATGTTTTCACTGCATCATGCATTCAAGAATTGGCTAACTTCTCTGAGAGTCTTCTACTCAAGTCACAACCTCAACTTATGAGCAATTCATCACATGCTCCAGAAGCTGAAATTGACTCTATTGAAGTGGTTGTGGATGTGTCCAAGTCTCGCCAATGGGGTATCTGTTTACTTCAACTCCTAGCACTTGTTTATATTTCTATCATGCTGGTCACTCCTGCTTATCTATCCATCACTGCTTTTCAAAGTTTCATACCAAATGTCAGTGAATCGGTATATGGAATGCCTTGGTCAAGCTATTTGATTTCTTTGACTTTGGCACCACTTTCTTGGATCCTTTGCATGGTTTCTACTTGCATTTGCATTTCCTTTTTTGGGAATTCTTTCTTGAGGCCAAACTATGCCCTTACACCTGAAATATCCATCTATTCAATGGATTTTGTCAAGTGGTGGGCGCTCTATAAAACTCAGGAAATTTCTTCAAAAGTTTTGGCAACACACCTCAGAGGAACAGTGTTTCTGAAATACTGGTTTGAGACGCTTGGTGCAAGAATTGGATCCTTAGTTTTGCTTGACACAGTGGATATCACTGACCCATCTCTGGTTTCAATTGGAGATGAAGTTGCCATTGCTGAAGGGGTTTTGGTTCAAAGCCATGAGGTGAAGAACGGAATTCTAAGTTTCCTTCCTATTAGAATAGGTAAAAATTCTTCAATTGGACCTTATTCTATTATTCAAAAAGGAAGTGTCATCAAAGAAGGATCTGAAGTACATCCCCTGGAAAAGGTTGAAGGAGGCCAACATGTGCTCAAACCTGCTAAGCTTAATAACGTTAAAGAGAATGCAGTGTTGCTTGTTACTACCAACAAAACTCAGTCCAATGCCATGTACCATTTTCTGGGGATCTATCTCACTGGCCTTGTCAGCTCCCTTGCTGCAGCTATTGCTTACATCCTGTACATAAGGCTCTTTCACTTGCCTGCATCATTCCAACACTTCTCATTTCTTTGCATATGTGGTGCCTTCCACTGGATCCCATTTACCATTGTAGCATATGCCACCATGTTTTCTAATGTCCCATCAAATCCCATTGCCTTTACCTTTTCATTTACCAGCGCATACCTGCTTCATGGCCTCATACTCAGCTCTCTCACTTGTGCTTTGACCCGTTTGCTCAAACTCAACCAAAACCAAACCCATTTTAAAACCTGGCTTAGACATCAACTGACCATTTTCTGCCACCATAGATTTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAGCACTGTTCCATTAGAGCCATCAACCCAGTTTCAAACCCTGAGTTAATGTCAATAGGTGATGGTGTCCATCTTGGTGATTTCAGCAAGATAATCACCGGTTTCCACTATTCCAATGGATATGCTTGTGGAAAAATAGAGGTTCAGGATAATTCAGTTGTGGGGAGTCAAAGCCTAATCCTCCCAGGTTCTGTTGTAGAAAAGAATGTCATTCTAGGTGCACTTTCAGTTGCTCCAATGAATTCTATCCTCCATGAGGGTAGCGTGTATATTGGCTCTCAAACCCGAGTTGCAACCAGAAACTCTTCATATGATTTAGATGAAAGGATAGAGGAGATGGACATGGAGTACAAAAAAGTAGTTGCAAACATGGCTGCAAATTTAGCTGTCACGACTATTAATGTCAAAGCAAGATACTTCCACCGCATTGGTGTTAGTGGAAAGGGGCACTTGAAAATCTATGACAAACTTGATGATGGCATTCCACTGCACAAGATTTTTCACCCTGGAAAAAGCTACCCTATAATGGTAAGACACAGTAATAGCTTGAGCGCTGATGATGATGCAAGGATTGATGCACGTGGTGCAGCTTTGAGGATTCTTTCTGATGCACCAGATTCTAACCACCATGTTCCCCTCATTGACCTGACACTAAAAACTGGCAACGCATTCTATGCTCGCACTCTTGCTGATTTTGCAACCTGGCTTGTCTGTGGACTTCCAGCGAGGGAGGAACTTGTTAAGCGCACCCCACATGTTCGTGAAGCAGTGTGGAATTCTCTTAGACATGCTAACTCATATGCTGAATTGCACTACTACTCAAACATTTGCAGGCTCATGCGCTTCACTGATGGACAAGAAATGTACGTGAAGTTTAAGCTAAGACCTTTTGACACAAGCATAAGTGAGGACACAGGTAAGGTTGTGCCAACTGGGATTCTTCCACCAGAAACAGGTGCAATTCCTAGGGATGAAAAGGACACACGTCCTTTGCTTTTCCTTGCTAAAGATTTTCAACGTCGCGTGAATTCCCCTGGTGGAGTTCGTTATGTGTTCCAAGTGCAACTTCGAGCCGTGCCAGAAGATGAAGCCGCACGTGACATGGCACTGGACTGCACCAAACCGTGGGATGAAAATGAGTTCCCTTACATTGATGTTGGAGAGATAAACATCAATGAGAATCTCTCTAGGGAAGAATCAGATAGGCTTGAATTTAACCCTTATCTCAAAAGCCATGAGTTGGATGTGATCCCTGCCACTTCCAACACCCAAAGTGCTTCAATTGATCATGGCCGTTCATTGATCTATGAGATTTGCCAGCACGTGCGTAACAGACAGCCACTCCCAGAATCTTGGAGGAACCTCGTAGAGCAGTCAAACGTTAAGGTGGACTTGTCTTGCTGTCCCGTGGCAGCATTATTGCCCAAAAAGGAGACAAAAAAAGTGATGACAACCTTAACCTTGACAAGAACCTGGTACCAGACATTCTCAGCACTTTTCACTCAACCGTTGTTGCAAACTGTTTTGCCTTACACGGTGGTGGGTTTAGCTGTTTTTGCTCCTTTAAACTTTCTTGTTAACATGAAGAACGTTGAGAAAATCCCAGTGCAATGGATGTTTCCTTTGTTTTGGGTTGTCTCAGGTGTCATGGCTGCACTGGCATGTGTGGTGGCCAAATGGATTCTCGTGGGAAGGAAGAAAGACGGTGAAACCGTACCCATATGGAGCAAAAGGGTCGCCATGGATAGCACGTGGCAAGCGATTAGAACATTGGTTGGGGATTACTTCATGGACATGGCAAGTGGGTCGTTTTTGTTTGTGATGTGGATGAAGCTGATGGGTGCAGACATAGACATGGAAGGTGGTGGAGCTTACGTGGACAGCACGGGGGCATTGTTGAACCCCGAAATGGTGAAGATTGAGAGAGGGGGTTGTGTGGGAAGAGAAGCATTGCTATTTGGACACATATATGAAGGTGATGAAGGTGGAATGGTGAAGTTTGGGGGAATCAAAATTGGTGAAGATGGGTTTGTGGGAAGTAGGGCTGTGGTCATGCCTGGTGTGCATGTGGAGAATGAGGCCAATCTTTCTGCTTTGTCTCTCGCCATGAAAGGAGAAATAGTTAGGTCAAGATAA 6687 0.4246 MDSHKLAVIDSSSGKYRDVKVADDYVSVMTLTLEIQEKVKNSGRFGVHALSEVASDLAPDYLERHGLKSVPKSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQRIAESLPIKLHYNTEVLAIRRNSDSVTVNVKGSNEIETMEYDKIIISGNFPLKYGRTYKSVPSTCLENETDVMDVSELEKDLFSKVETNDYYTTVLKIKGLEHMPVGFYYFGEYMEDPSTIGNPVAMQKFYADSNIFLFWSYGNSADIKGPTVTELAIKSIESMGGEVENFILQRRFKYFPHVSSQDMRNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALICKNFASSSDLPVFPYTKSLFPLQTEIQKKEPKELGELPGVKFPNFPALNSYLKHWGTHPVTQNRTLYTWLNEGGTVVDKRTYGEQHLNASCIAHKLLTSQKPVIKPGDRVLLVYVPGLDFVDAFFGCLRAKVLPVPVLPPDPMQRGGQALMKIENITKSCGIVAILSTVSYHSAVRVGLVKSLISLTGKNGKSTAQWPKLPWLHTDTWVNNSRNSAVEDVDDQCESQPGDVCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRIIYKSTSRTVLVSWLPQYHDMGLIGGLFTALVSGGSAVLFSPLTFIKKPLLWLETISKYQATHSAGPNFAFELVVRRLESEKDKLQNLDLSSMIFLMVAAEPVRMKTLNRFLDLTTPFGLSQKVMAPGYGLAENCVFVSCAFGEGYPILVDWQGRVCCGYIHPGDADVDIAIVDPESGEELEEDGKEGEIWISSPSAGIGYWGKEELSQKTFRNELQNHPGRNYTKTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVESSSEFLRPGCCAVISVPEEILSAKGISLPDGSDQVGLVVVAEVRDGKTVSKDVIEHIQTRVVEEHGVSVASVKLIKPRTISKTTSGKIKRFECLKQFSDETLSLVPQPILTKKSLVRSFTTGTCREGRTPRAHLVRSSTPLPIPRISNKEIVEHLKRLISEQSGIPVNNISVTDNMSTYGIDSIGVVKATQKLTDFLGVPVAAIDVFTASCIQELANFSESLLLKSQPQLMSNSSHAPEAEIDSIEVVVDVSKSRQWGICLLQLLALVYISIMLVTPAYLSITAFQSFIPNVSESVYGMPWSSYLISLTLAPLSWILCMVSTCICISFFGNSFLRPNYALTPEISIYSMDFVKWWALYKTQEISSKVLATHLRGTVFLKYWFETLGARIGSLVLLDTVDITDPSLVSIGDEVAIAEGVLVQSHEVKNGILSFLPIRIGKNSSIGPYSIIQKGSVIKEGSEVHPLEKVEGGQHVLKPAKLNNVKENAVLLVTTNKTQSNAMYHFLGIYLTGLVSSLAAAIAYILYIRLFHLPASFQHFSFLCICGAFHWIPFTIVAYATMFSNVPSNPIAFTFSFTSAYLLHGLILSSLTCALTRLLKLNQNQTHFKTWLRHQLTIFCHHRFAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSKIITGFHYSNGYACGKIEVQDNSVVGSQSLILPGSVVEKNVILGALSVAPMNSILHEGSVYIGSQTRVATRNSSYDLDERIEEMDMEYKKVVANMAANLAVTTINVKARYFHRIGVSGKGHLKIYDKLDDGIPLHKIFHPGKSYPIMVRHSNSLSADDDARIDARGAALRILSDAPDSNHHVPLIDLTLKTGNAFYARTLADFATWLVCGLPAREELVKRTPHVREAVWNSLRHANSYAELHYYSNICRLMRFTDGQEMYVKFKLRPFDTSISEDTGKVVPTGILPPETGAIPRDEKDTRPLLFLAKDFQRRVNSPGGVRYVFQVQLRAVPEDEAARDMALDCTKPWDENEFPYIDVGEININENLSREESDRLEFNPYLKSHELDVIPATSNTQSASIDHGRSLIYEICQHVRNRQPLPESWRNLVEQSNVKVDLSCCPVAALLPKKETKKVMTTLTLTRTWYQTFSALFTQPLLQTVLPYTVVGLAVFAPLNFLVNMKNVEKIPVQWMFPLFWVVSGVMAALACVVAKWILVGRKKDGETVPIWSKRVAMDSTWQAIRTLVGDYFMDMASGSFLFVMWMKLMGADIDMEGGGAYVDSTGALLNPEMVKIERGGCVGREALLFGHIYEGDEGGMVKFGGIKIGEDGFVGSRAVVMPGVHVENEANLSALSLAMKGEIVRSR* 2229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0282 2228 ProSiteProfiles catalase family profile. 1586 2228 IPR018028 GO:0004096|GO:0006979|GO:0020037
Gso15g0282 2228 SUPERFAMILY Acetyl-CoA synthetase-like 408 979 - -
Gso15g0282 2228 SUPERFAMILY Heme-dependent catalase-like 1647 1961 IPR020835 GO:0020037
Gso15g0282 2228 Gene3D Catalase core domain 1614 1969 - -
Gso15g0282 2228 Pfam Phosphopantetheine attachment site 1029 1092 IPR009081 -
Gso15g0282 2228 Gene3D - 1016 1095 IPR036736 -
Gso15g0282 2228 Gene3D Hexapeptide repeat proteins 1481 1613 - -
Gso15g0282 2228 Gene3D - 383 853 IPR042099 -
Gso15g0282 2228 Pfam AMP-binding enzyme 425 859 IPR000873 -
Gso15g0282 2228 Gene3D - 854 981 IPR045851 -
Gso15g0282 2228 SUPERFAMILY Trimeric LpxA-like enzymes 1260 1335 IPR011004 -
Gso15g0282 2228 ProSitePatterns Phosphopantetheine attachment site. 1052 1067 IPR006162 -
Gso15g0282 2228 SUPERFAMILY Trimeric LpxA-like enzymes 2138 2221 IPR011004 -
Gso15g0282 2228 Gene3D Hexapeptide repeat proteins 1260 1375 - -
Gso15g0282 2228 ProSitePatterns Putative AMP-binding domain signature. 581 592 IPR020845 -
Gso15g0282 2228 SMART Phosphopantetheine attachment site 1026 1097 IPR020806 GO:0031177
Gso15g0282 2228 Pfam Flavin containing amine oxidoreductase 92 166 IPR002937 GO:0016491
Gso15g0282 2228 Gene3D - 288 352 IPR036188 -
Gso15g0282 2228 Gene3D - 78 242 IPR036188 -
Gso15g0282 2228 SUPERFAMILY Trimeric LpxA-like enzymes 1496 1631 IPR011004 -
Gso15g0282 2228 CDD FAAL 400 973 IPR040097 GO:0008610
Gso15g0282 2228 SUPERFAMILY FAD/NAD(P)-binding domain 97 169 IPR036188 -
Gso15g0282 2228 SUPERFAMILY ACP-like 1020 1103 IPR036736 -
Gso15g0282 2228 PANTHER AMINE OXIDASE 1 2228 - -
Gso15g0282 2228 PANTHER AMP-BINDING ENZYME 1 2228 - -
Gso15g0282 2228 ProSiteProfiles Carrier protein (CP) domain profile. 1023 1097 IPR009081 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0282 Gso-Chr15 2572426 2580300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0282 577 892 Monolignol Biosynthesis Gene Families AT1G20480 27.445 1.06e-19 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0282 - - gsj:114374875 3832.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0282 15 2572426 2580300 Gso11g3525 11 51076789 51078513 GST
Gso15g0282 15 2572426 2580300 Gso12g0456 12 4017164 4020026 PCT
Gso15g0282 15 2572426 2580300 Gso11g1111 11 9967696 9974607 PCT
Gso12g0456 12 4017164 4020026 Gso15g0282 15 2572426 2580300 PCT
Gso11g1111 11 9967696 9974607 Gso15g0282 15 2572426 2580300 PCT