Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0270 ATGGATCACCAATCTGGCCAGGGATTTGATTCAGATGATAGTGACCTTGATATGCAAGCAGAAATTAGTGACAAACACGAGAAGGTAGATGAATTTTCAAAAAACTTAGAAATATGTGGAGGTGAAGATGAAATGTTTGTTGAACAACCTGTAGCAGACATTTCAACTGATATAGAAGCTGTAGAACCATTCATAGGCATGGAGTTCAATTCAAGAGAGGAAGCCAGAGAATTCTACATTGCCTATGGTAGGAGGATAGGGTTTACAGTACGAATACACCATAACCGTCGTTCACGAGTAAATAACCAGGTTATTGGTCAAGATTTTGTCTGTTCTAAAGAAGGCTTTCGTGCAAAAAAGTATTTACACAGGAAAGATAGAGTGCTGCCTCCTCCACCAGCCACTCGGGAAGGTTGTCAGGCCATGATAAGGCTGGCTTTGCGGGATAGAGGGAAGTGGGTTGTCACCAAATTTGTGAAGGAGCATACTCATAAACTAATGAGTCCCAGTAAAGTTCCATGTCGAGGATCTGGGAAGCACTTGGTTAGTGAGGATGAGAAGGATAAAAGAATCCGTGAGCTGTCACTTGAGTTGTACAATGAAAGACAAAAGTGTAAACGACGTTGTGCTGCATATGAAGAGCAGTTAAATGTGATTTTAAATGATTTAGAAAAGCACACAGAACATATCTCTAAAAAGGTTGCTGCTGTAGTAAGAAGCATAAGAGAGATTGAGGAGGAAAAATCAGATTCGGATGGTGGGCAATTAGAGCCATCATAG 780 0.4077 MDHQSGQGFDSDDSDLDMQAEISDKHEKVDEFSKNLEICGGEDEMFVEQPVADISTDIEAVEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYLHRKDRVLPPPPATREGCQAMIRLALRDRGKWVVTKFVKEHTHKLMSPSKVPCRGSGKHLVSEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNVILNDLEKHTEHISKKVAAVVRSIREIEEEKSDSDGGQLEPS* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0270 259 MobiDBLite consensus disorder prediction 1 27 - -
Gso15g0270 259 Pfam FAR1 DNA-binding domain 77 167 IPR004330 -
Gso15g0270 259 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 254 - -
Gso15g0270 259 Coils Coil 202 229 - -
Gso15g0270 259 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0270 Gso-Chr15 2449128 2453235 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso15g0270 FAR1 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0270 - - gmx:100810283 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0270 15 2449128 2453235 Gso11g3538 11 51185873 51190053 GST