Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0268 ATGAACCTATGTCCAGTTTTATTTGGGACTCTATTTGAGGTTGTGGTTTTTTCATGCTTGTGGTTGCAAGTTTCAAGCCTTGGTTCCATGTCTTCCATTGCCGTCTCTTATGGCGACAAAGGGTCAGTATTTTGTGGCTTGAAATCGGATGGATCTCACACTGTGACCTGTTATGGAATAAACTCAGCCATAATTTATGGAACGCCAACGCATTTTCCATTCCTTGGTCTTACTGCTGGTGATGGTTTTGTGTGTGGACTTCTAATGAGTTCTAACCAACCTTATTGCTGGGGTAGCAGTGGCCATGTTGAAATGGGTGTGCCACAGCCTATGGTTAAGGGAGCTCAGTACCTAGAGATCAGTGCTGGGGACTATCACGTTTGTGGATTGAGGAAACCTTTGACTGGAAGACACAGGAACACTTCTTTGGTTGACTGTTGGGGCTACAACATGACCAACAACTATGTGTTTGACGGGCAGGTTCAATCAATCTCAGCAGGTTCTCAATTCAACTGTGGTTTGTTTTCTCAGAATAGGACTGTGTTCTGTTGGGGGGATGAGACTAGTAGCCAAGTTATTTACATGATCCCCCAAGGCATAAGGTTTCAGAAGATCTCTGCTGGAGGGTACCATGTGTGTGGAATCTTAGAAGGGGTCAATTCTAGAGCTGTTTGTTGGGGGAGGAGCATGTTGGATTTGGGGGAAGAACTTTCAATTTCATTGATACGTTCAGGACAAGGTAATGTTGAATTGGCTCCAAATGATCCCATACTTTCTGTGGTGGGGGGGAAGTTCCATGCATGTGGCATTAGGAGCCATGATCGTGGAGTGGTTTGTTGGGGATATAGTTTCAAAGCAGGCACCCCAGTTCCTAGTGGGATTAAGGCCTTTGAGATTGGTGCTGGGAATTATTTCACCTGTGGAATACTTGTTGAGAAATCTCTTATGCCTGTTTGTTGGGGTGTTGGCTTCCCTACCTCTCTCCCTTTGCCTGTTTCACCAAGAATGTGTAGGTCTGCTCCATGTGCTCCAGGTTACTATGAAACCCAACAAAATGGTCTTTGCAAGTCCCCAGATTCTCACATTTGCATGCCATGCAGTGCTGCTTGTCCTCCTGAGATGTATCAGAGAAGTGGATGCAATTTGAAATCTGACATACTGTGTGAATATAATTGTTCTCTTTGTTCCTCACCTGAATGCCTGTCCAATTGCTCCTCTTCCTATTCCAACGCTGCCTCTGGCAAGAGAAGTGAAAGATTCTGGTCTATGCAGCTTCCAGTGCTTATTGCTGAGATAGCCTTTGCTGTTTTCTTAGTTAGCATTGTGTCTATAACTGTTGTTTTGTATGTTCGCTACAAGCTAAGAGATTGTCAGTGTTCGGGGCCAAAGGTGAAGAAACTAAAAGGGAGCTCTTCAAACCAAAAGGACCAGAAATGCAAGATCCGACCGGACTTGGAGGAGTTCAAGATTAGGAGGGCACAGATGTTCTCCTATGAGGAGCTTGAAAGGGCAACTAGTGGATTCAAAGAAGAGTCCATAGCGGGGAAGGGAAGTTTTTCTTGTGTGTTCAAAGGGGTTCTCAAAGATGGTACTGTTGTTGCTGTTAAAAGGGCCATAGTGTCTCCCAACATGCAGAAGAATTCCAAGGAGTTTCACACCGAGCTTGACTTGCTCTCTAGGTTGAACCATGCACACTTGCTCAATCTACTAGGCTACTGTGAAGAAGGTGGAGAGAGGCTCCTTGTTTATGAGTACATGGCTCATGGTTCTTTGCATCAACACCTGCATGGCAACAAGGTGATGCAAGAGCAAATGGATTGGGTGAGAAGGGTAACAATTGCAGTACAAGCAGCTCGCGGAATCGAATATTTGCATGGATATGCTTGTCCACCCGTGATTCACAGAGACATTAAGTCTTCAAACATCCTCATTGATGAAGAACACAATGCTAGAGTGGCTGATTTTGGTTTGTCACTACTTGGTCCTGCAGATAGTAGCTCCCCACTAGCTGAACTACCAGCTGGGACTCTTGGCTATCTTGATCCTGAATACTACAGGCTTCATTATCTTACCACAAAGTCTGATGTGTACAGCTTTGGTGTTCTACTTTTGGAGATTTTAAGTGGTAGAAAAGCCATTGACATGCAATTTGAAGAAGGGAACATAGTTCAATGGGCAGTGCCTTTGATCAAGTCAGGAGATATAGCTGCAATTTTGGACCCAACTTTGAAACCTCCTCCTGATCTTGATGCCTTGAGAAGGATAGCTAATGTTGCTTGTAAAAGTGTGAGAATGAGAGGTAAGGATAGGCCTTCAATGGACAAAGTGACAACAGTGTTGGAAAGAGCACTTGCACAGTTAATGGGTAGCCCTTGTATTGAGCAGCCAATTTTGCCCACTGAGGTGGTTTTGGGAAGTAACAGATTGCACAAGAAATCATCTTCAAACAGGTCAGCCTCAGAAAGCACTGATGTGGAGGATCAGAGGTTTGAGTTTAGAGCGCCATCATGGATCACTTTCCCCAGTGTCACTTCTTCTCAAAGAAGATCAGGCTCGGAGGCCGATGTCGAGGGAAAAAATGCAGAAGGGAGGAATTTGAGCAATGTTGGAGGTGGTGGTGGTGGTGGAGGTGATGTTTTGAGAAGTCTTGATGAAGAGATTGGTCTTGCCTCTCCTCGAGAGAGATTGTTCTTGCAACACAACTTCTAA 2709 0.4481 MNLCPVLFGTLFEVVVFSCLWLQVSSLGSMSSIAVSYGDKGSVFCGLKSDGSHTVTCYGINSAIIYGTPTHFPFLGLTAGDGFVCGLLMSSNQPYCWGSSGHVEMGVPQPMVKGAQYLEISAGDYHVCGLRKPLTGRHRNTSLVDCWGYNMTNNYVFDGQVQSISAGSQFNCGLFSQNRTVFCWGDETSSQVIYMIPQGIRFQKISAGGYHVCGILEGVNSRAVCWGRSMLDLGEELSISLIRSGQGNVELAPNDPILSVVGGKFHACGIRSHDRGVVCWGYSFKAGTPVPSGIKAFEIGAGNYFTCGILVEKSLMPVCWGVGFPTSLPLPVSPRMCRSAPCAPGYYETQQNGLCKSPDSHICMPCSAACPPEMYQRSGCNLKSDILCEYNCSLCSSPECLSNCSSSYSNAASGKRSERFWSMQLPVLIAEIAFAVFLVSIVSITVVLYVRYKLRDCQCSGPKVKKLKGSSSNQKDQKCKIRPDLEEFKIRRAQMFSYEELERATSGFKEESIAGKGSFSCVFKGVLKDGTVVAVKRAIVSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEYMAHGSLHQHLHGNKVMQEQMDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQFEEGNIVQWAVPLIKSGDIAAILDPTLKPPPDLDALRRIANVACKSVRMRGKDRPSMDKVTTVLERALAQLMGSPCIEQPILPTEVVLGSNRLHKKSSSNRSASESTDVEDQRFEFRAPSWITFPSVTSSQRRSGSEADVEGKNAEGRNLSNVGGGGGGGGDVLRSLDEEIGLASPRERLFLQHNF* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0268 902 Pfam Protein kinase domain 509 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0268 902 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Gso15g0268 902 MobiDBLite consensus disorder prediction 843 877 - -
Gso15g0268 902 Pfam Regulator of chromosome condensation (RCC1) repeat 161 191 - -
Gso15g0268 902 SMART serkin_6 508 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0268 902 PANTHER RECEPTOR-LIKE KINASE 1 902 - -
Gso15g0268 902 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 1 902 - -
Gso15g0268 902 SUPERFAMILY RCC1/BLIP-II 244 336 IPR009091 -
Gso15g0268 902 Gene3D - 73 343 IPR009091 -
Gso15g0268 902 ProSiteProfiles Protein kinase domain profile. 508 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0268 902 Gene3D Phosphorylase Kinase; domain 1 481 585 - -
Gso15g0268 902 SUPERFAMILY RCC1/BLIP-II 26 229 IPR009091 -
Gso15g0268 902 SUPERFAMILY Protein kinase-like (PK-like) 490 780 IPR011009 -
Gso15g0268 902 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 341 388 IPR001368 GO:0005515
Gso15g0268 902 Gene3D Transferase(Phosphotransferase) domain 1 586 790 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0268 Gso-Chr15 2428970 2432182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0268 11 902 Receptor kinase-like Gene Family AT3G59420 66.336 0.0 1209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gso15g0268 Pkinase 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0268 - - gmx:100809215 1776.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0268 15 2428970 2432182 Gso11g3541 11 51205169 51208864 GST
Gso12g0436 12 3792547 3796244 Gso15g0268 15 2428970 2432182 PCT
Gso11g1087 11 9718650 9722400 Gso15g0268 15 2428970 2432182 PCT