Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0267 ATGAATCTGCTTCTGCTGTCTCTGCACGGAACACAAAAACATAAAAAGTTCATTTTCACAATCACGGTCGCTTCCTACGACTATCGAATTCGCGTCAGCCTCAATTCTCACAGATATTTTGTTGCTGCAGTGGAGTTTGGGATTGATGCCTCCATTAATGGTGAGACAGTAGGAAATGCTACTATAGTGCAGATTAATAGCAGCACAGCTGATGGAAACAAAGTGGGCTGCAGTTCTTTTAATCCTGCTTATAAACAAGGTCATGATGATAATATAACTCAAGATTCTTCTGGAGGGGACACAATCCCATCAGGAATTCCTGCAGTATCGGTTGCGTCAGTTGATGAGCCCTATGTGGGCCAGGAGTTTGAATCTGAAGCTGCAGCACATGCATTCTATAATGCATATGCTAAACGTGTTGGATTCATCATACGTGTAAGTAAGCTCTCACGATCAAGGCGTGATGGAACTGCTATTGGACGGGCTCTTGTTTGCAACAGAGAAGGTTACAGAATGCCCGACAAACGTGAAAAGATTGTAAGGCAAAGGGCGGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTAAGTTCTGGTAAATGGGTTATTACAAAGTTTATAATGGAACACACACATCCTTTGACACCTGGAAAAGGTAGAAGAGATTGCATTTATGAGCAATATCCGAATGAACATGATAAAATTCGAGAACTATCCCAGCAGTTGGCTATAGAGAGAAAGCGATCTGCAACCTATAAAAGGCATCTTGAATTGATATTTGAGCAAATTGAAGAGCACAATGATAGTCTTTCAAAGAAAATACAACACATAGTGGACAGTGTGAAGGAGATGGAAACCAAAGAACAGAATCAGAGATAG 888 0.4144 MNLLLLSLHGTQKHKKFIFTITVASYDYRIRVSLNSHRYFVAAVEFGIDASINGETVGNATIVQINSSTADGNKVGCSSFNPAYKQGHDDNITQDSSGGDTIPSGIPAVSVASVDEPYVGQEFESEAAAHAFYNAYAKRVGFIIRVSKLSRSRRDGTAIGRALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVITKFIMEHTHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIERKRSATYKRHLELIFEQIEEHNDSLSKKIQHIVDSVKEMETKEQNQR* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0267 295 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 42 293 - -
Gso15g0267 295 Pfam FAR1 DNA-binding domain 132 218 IPR004330 -
Gso15g0267 295 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 42 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0267 Gso-Chr15 2424825 2428097 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso15g0267 FAR1 2.6e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0267 - - gmx:100806900 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0267 15 2424825 2428097 Gso12g0433 12 3768097 3771139 PCT
Gso15g0267 15 2424825 2428097 Gso11g1084 11 9690619 9693806 PCT
Gso12g0433 12 3768097 3771139 Gso15g0267 15 2424825 2428097 PCT
Gso11g1084 11 9690619 9693806 Gso15g0267 15 2424825 2428097 PCT