Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0259 ATGGATAAAGACAAATCTCTAGGTTTGCCACCTCCGTCTGGACGTTATTCTGGTTACTCGTCCACCGGAAGTGTTTTCAACGTGAAATCTGAACCGTCCCCGTCGTCGTCGACCACGTTGTATCCGCCATTGGCTCCGGGAACCACCAGTTCCGAGTCTAGCCATTTTGGACATGGATTGTCCACGGATTCTAGTGGTTTTAGTCATGATATTAGCAGAATGCCTGATAATCCCCCGAGAAATAGAGGTCATAGGCGTGCTCATTCGGAGATTCTCACTTTACCGGATGATATTAGTTTCGACAGTGACCTTGGTGTTGTTGGAGGTGGTGATGGTCCTTCCTTCTCCGATGATGCCGAGGAGGACTTGCTGTCCATGTACCTTGATATGGATAAGTTCAATTCATCGTCGGCAACGTCCACGTTTCAAATGGTTGAGCCGTCTAATGCTGTGGGAGCATCGGCTTCAACACCGGCGTCAGGGGCACCCACCTCTTCTACCGAGAATGTTGTTATTGGGACTAATGAAAGGCCCAGAGTTAGACACCAGCATAGTCAATCCATGGACGGCTCAACCACCATCAAGCCTGAGATGCTGGTTTCAGGTTCAGAAGACATGTCTGCGGCTGATTCCAAAAAAGCAATGTCAGCTGCCAAGCTTGCTGAACTTGCCTTGATTGACCCCAAACGTGCAAAAAGGATATGGGCAAATAGGCAGTCTGCTGCGAGGTCAAAAGAGAGAAAGATGCGATACATTGCTGAGCTTGAAAGGAAGGTGCAAACATTGCAAACGGAAGCAACATCTTTGTCTGCACAATTAACTCTCTTGCAGAGAGATACAAATGGCTTAAATTCTGAGAACAATGAACTGAAGCTGCGGTTGCAAACCATGGAGCAACAAGTTCACTTGCAAGATGCATTAAACGATGCATTAAAAGAGGAAATTCAGCATTTGAAAATATTGACTGGGCAAGCTATGCCACCTAATGGAGGACCTATGATGAACTTTGCTTCTTTTGGAGGGGGGCAGCAATTCTATCCCAATAATCATGCCATGCACACCCTTTTAGCTGCACAACAGTTTCAACAGCTTCAAATTCACCCTCAAAAGCAGCAGCAGCATCAGTTTCAGCAGCTTCAGCAACAACAAATGCTGCAGCAGCAGCGGGAACAGCACCAACAATCAATTGACTTGAAAATGAGAGAAGCTACACCTACTCCATGCCCCAAAGACAATGCGTCATCAGATGTAAATCCTTCTGGGGCCAAGGACTGTTGA 1278 0.4679 MDKDKSLGLPPPSGRYSGYSSTGSVFNVKSEPSPSSSTTLYPPLAPGTTSSESSHFGHGLSTDSSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGGDGPSFSDDAEEDLLSMYLDMDKFNSSSATSTFQMVEPSNAVGASASTPASGAPTSSTENVVIGTNERPRVRHQHSQSMDGSTTIKPEMLVSGSEDMSAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENNELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMPPNGGPMMNFASFGGGQQFYPNNHAMHTLLAAQQFQQLQIHPQKQQQHQFQQLQQQQMLQQQREQHQQSIDLKMREATPTPCPKDNASSDVNPSGAKDC* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0259 425 MobiDBLite consensus disorder prediction 1 94 - -
Gso15g0259 425 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 417 - -
Gso15g0259 425 Coils Coil 245 314 - -
Gso15g0259 425 Gene3D - 228 281 - -
Gso15g0259 425 MobiDBLite consensus disorder prediction 383 425 - -
Gso15g0259 425 SUPERFAMILY Leucine zipper domain 229 280 IPR046347 GO:0003700|GO:0006355
Gso15g0259 425 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 227 290 IPR004827 GO:0003700|GO:0006355
Gso15g0259 425 MobiDBLite consensus disorder prediction 15 71 - -
Gso15g0259 425 SMART brlzneu 225 289 IPR004827 GO:0003700|GO:0006355
Gso15g0259 425 Pfam bZIP transcription factor 229 287 IPR004827 GO:0003700|GO:0006355
Gso15g0259 425 MobiDBLite consensus disorder prediction 151 173 - -
Gso15g0259 425 MobiDBLite consensus disorder prediction 75 92 - -
Gso15g0259 425 CDD bZIP_plant_RF2 230 279 IPR044759 GO:0003700|GO:0006355
Gso15g0259 425 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 417 - -
Gso15g0259 425 MobiDBLite consensus disorder prediction 151 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0259 Gso-Chr15 2362207 2367593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0259 15 358 bZIP Transcription Factor Family AT1G06070 71.221 9.00e-169 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso15g0259 bZIP_1 5.9e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0259 - - gmx:100786738 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0259 15 2362207 2367593 Gso11g3546 11 51241167 51245667 GST
Gso15g0259 15 2362207 2367593 Gso12g0427 12 3727769 3732715 PCT
Gso15g0259 15 2362207 2367593 Gso11g1079 11 9650998 9656264 PCT
Gso12g0427 12 3727769 3732715 Gso15g0259 15 2362207 2367593 PCT
Gso11g1079 11 9650998 9656264 Gso15g0259 15 2362207 2367593 PCT