Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0254 ATGCCGAAGCAAATTCATGAGATTAAAGACTTCCTCCTCACTGCAAGGAGGAAGGATGCACGCTCTGTGAAAATCAAGCGGAGCAAGGATGTAGTGAAGTTCAAGGTCCGTTGCTCCAAGTACCTGTACACTCTGTGTGTGTTTGATTCTGAGAAGGCTGATAAGTTGAAGCAATCACTTCCTCCAGGTTTAAGCGTGCAGGATGTGTGA 210 0.4619 MPKQIHEIKDFLLTARRKDARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLSVQDV* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0254 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Gso15g0254 69 PANTHER - 1 69 - -
Gso15g0254 69 Pfam Ribosomal L38e protein family 2 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Gso15g0254 69 Gene3D - 1 69 IPR038464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0254 Gso-Chr15 2304615 2306054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0254 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 5.73e-44 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0254 K02923 - gmx:100806030 139.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0254 15 2304615 2306054 Gso11g3550 11 51286417 51288131 GST