Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso15g0247 | ATGGAATACCCTTTTTCCCCAAAGGAGAGTGTAATTGGGGATTGGCAATCTTCTGGAGCTCAGTTGGAGGGATCAGCATCATTAGATGGCAGAATGAGCAATTCAATACCAGAGGATATGCCCAATAGCTTCTCTGAGCTCATGAACTTTGATACCTATGCTGGTTTGTGCAACAGCCCATCCATAACTGATCAGATTTTGGCTAATGACCTTCCATCATTTGCCTCATTATCATATCCGTTGCCCGATGGGTTCAATCTAGTCCAACAGTACAGTGGGCAATACTGTATGTCAGGAGTTGGCAGAAATAACAATGACATGGAAAGCTCCCCCATTTATGGGGAGAAAGTTGTGTGTCAGCAAATGGACACCCTACTTGGTTGCTTAAATGATACAAATGAAGCAAATAACTTGAATTCTAAGCTAAAAATGAATAGCTCTTCTCAACATCTCAATAACTTTGATACAGGCAATTATATGATGTCTAGGTCACCTGGTTTGTCACTTGATGAGAGAATGCTGAGGGCTTTGTCCTTCTTTAAGGAATCAGCTGGTGGGGGAATATTGGCACAAGTTTGGGTACCCATAAAGCATGGTGATCAGTTCATCTTAAGCACGAGTGACCAACCTTATTTGCTAGATCAAATGCTCGCAGGGTATCGTGAAGTGTCCAGGACATTTACATTTTCTACAGAAGGAAAATCTGGTTGTTTCTTAGGACTTCCTGGTCGTGTGTTTACGTCCAAAGTTCCTGAGTGGACTTCAAATGTTGGTTATTACAGTATGAGTGAGTACTTAAGGTTTGAGCATGCAATTAATCACAAGGTTCGTGGATCAATTGCAATTCCCATATTTGATCTGCACTCTGAATTTCCATGCTGTGCTGTACTGGAACTTGTCACTACAAAGGAAAAGCCAGATTTTGACAGAGAATTGGAAATTGTTCGTCATGCACTCCAGCTTGTAAATTTAAGGACTGTCAAGACTCTCAGATGTCTTCCCCAGAGTCTTTCAAACAACAAAAAAGCTACTTTGACCGAGATAGTTGATGTGTTACGATCTGTCTGTCATGCACATAGATTACCACTGGCACTGACATGGATTCCCTGTGGTTACACTGAGTGCTCAAGAGGTGAAGCTTCAAGAATACGAATTAAAGGGGGTCATTCAACTTCTAGTGAAAAAAGCGTACTGTGTCTTGAAGAATCTGCTTGCTACATAACTGATAGAGCAATGGCAGGATTTATCCGTGCATGCATGGAACATCATCTTGAGGAAGGGAAAGGTATAGCTGGGAAAGCTCTTCAATCAAATCATCCTTTCTTCTATCCTGATGTGAAAACATATGATATTAGTGAATATCCACTTGTCCATCATGCACGCAAGTATAATTTGAATGCTGCAGTTGCAATTAGGCTAAGGAGTACTTATACTAATGATGATGATTACATATTGGAATTCTTTCTGCCTGTCAATATGAGAGGGAGTTCAGAGCAGCAACTTTTATTAGACAACCTCTCGGGTACGATGCAGAGAATTTGTAGTAGTTTGAGGACAGTTTCAGAAACCGAATTATCAGGAATAGAAAGCTCACCAGTGGGGCTTGGAAAGAAAAATGCCCCCAGTTTTTTTCCTTTGTCAAGTAGAAACTCTGACATACCATTAATAAATGGTGACTGTGATTCTGTCCAGAAGATGTCATTGAAGGCAACAACTAACCTAAAGGACAACGAAATTGAGCCTTCTCCTAACCAGGAAAGAAATGGATCAAAAAGACAGGTCCAGAAAAATAGAAGTACATCGGAGAAGAATGTTAGCTTGAGTGTTCTCCAACAATACTTTTCTGGTAGTCTGAAGGACGCTGCAAAAAAGATTGGTGTTTGCCCAACAACTCTGAAAAGGATATGCAGGCAACATGGAATTCCAAGGTGGCCATCCCGCAAGATTAATAAAGTCAATCGATCATTGAAGAAGATACAGACTGTGCTTGACTCTGTCCAGGGCATGGAAGGAGGGTTGAAGTTTGATCCTTCTATGGGGGCGTTTGTGGCAGGAGGGTCAATCATCCAGGAAATTGATGCACCTAAAAGTACTATAAAAGACCCCGTGCCTGTTACTCAAGATGCATTCTCAGTACCACCCGCACCTTGTAGTGAAGGTGAGAATTTTTCAATTAAGTTGGAGGGAAAATTGAAGAAAACCAATGTTTCTTCAGTTGATTACAGTGAAGATTCAAAATCTATGGCAATCAATGATGGGTCGTGCCAGATGGCAAGCCTTTGCACCAAGGTGCAGGATTGTCCTGAACAAGCTTGCTTGGGTTCTGTTCTTGCAAAAGAACATGATAAACGAATTCTGAACAAGGGTGGTTTGAGTGTAGAAAAATTTAAACACAATATTGTTGGCCAGAGTTCAAAATCTTTGATTGCTGATGAGATGGACATTGGTGTAGATGGGGATGATGGAGTTGTTGAACGTAACCACCCTACTTCCTCAAGCTTGACAGACTCATCTAATGGCTCTGGCTCAATGATGCATAGCAGTTCATCAGGCTCTCGGAGCTTTGAGAACCAGGATCAGTCCAAAGTCAAATCAACCATCATTGATTGTGGGTCGAAACTAATTGTCAAAGCTACCTATAGAGAAGACACCATTCGTTTCAAGTTTGATCCATCTGAAGGTTGTTTCAGACTATATGAAGAAGTTGCAGCAAGATTCAAACTACAAAATGGGTTATTTCAGCTCAAATATCTAGATGATGAAGAGGAATGGGTGATGTTGGTGAATGATGCTGATTTGCAAGAGTGTATAGAAATATTGGATGATATTGGCACACGTAGCGTCAGGTTTCTTGTTCGTGATATGCCTTCCGTTTTAAGCAGTTCTGGCAGTAGCAATAGCTACTTGGGAGGCAGCTCATAG | 2922 | 0.412 | MEYPFSPKESVIGDWQSSGAQLEGSASLDGRMSNSIPEDMPNSFSELMNFDTYAGLCNSPSITDQILANDLPSFASLSYPLPDGFNLVQQYSGQYCMSGVGRNNNDMESSPIYGEKVVCQQMDTLLGCLNDTNEANNLNSKLKMNSSSQHLNNFDTGNYMMSRSPGLSLDERMLRALSFFKESAGGGILAQVWVPIKHGDQFILSTSDQPYLLDQMLAGYREVSRTFTFSTEGKSGCFLGLPGRVFTSKVPEWTSNVGYYSMSEYLRFEHAINHKVRGSIAIPIFDLHSEFPCCAVLELVTTKEKPDFDRELEIVRHALQLVNLRTVKTLRCLPQSLSNNKKATLTEIVDVLRSVCHAHRLPLALTWIPCGYTECSRGEASRIRIKGGHSTSSEKSVLCLEESACYITDRAMAGFIRACMEHHLEEGKGIAGKALQSNHPFFYPDVKTYDISEYPLVHHARKYNLNAAVAIRLRSTYTNDDDYILEFFLPVNMRGSSEQQLLLDNLSGTMQRICSSLRTVSETELSGIESSPVGLGKKNAPSFFPLSSRNSDIPLINGDCDSVQKMSLKATTNLKDNEIEPSPNQERNGSKRQVQKNRSTSEKNVSLSVLQQYFSGSLKDAAKKIGVCPTTLKRICRQHGIPRWPSRKINKVNRSLKKIQTVLDSVQGMEGGLKFDPSMGAFVAGGSIIQEIDAPKSTIKDPVPVTQDAFSVPPAPCSEGENFSIKLEGKLKKTNVSSVDYSEDSKSMAINDGSCQMASLCTKVQDCPEQACLGSVLAKEHDKRILNKGGLSVEKFKHNIVGQSSKSLIADEMDIGVDGDDGVVERNHPTSSSLTDSSNGSGSMMHSSSSGSRSFENQDQSKVKSTIIDCGSKLIVKATYREDTIRFKFDPSEGCFRLYEEVAARFKLQNGLFQLKYLDDEEEWVMLVNDADLQECIEILDDIGTRSVRFLVRDMPSVLSSSGSSNSYLGGSS* | 974 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso15g0247 | 973 | Pfam | PB1 domain | 876 | 954 | IPR000270 | GO:0005515 | |
| Gso15g0247 | 973 | CDD | PB1_NLP | 874 | 954 | IPR034891 | - | |
| Gso15g0247 | 973 | PANTHER | PROTEIN NLP8 | 728 | 969 | IPR045012 | GO:0003700 | |
| Gso15g0247 | 973 | PANTHER | PROTEIN NLP8 | 7 | 728 | IPR045012 | GO:0003700 | |
| Gso15g0247 | 973 | Pfam | RWP-RK domain | 604 | 652 | IPR003035 | - | |
| Gso15g0247 | 973 | Gene3D | - | 870 | 952 | - | - | |
| Gso15g0247 | 973 | SMART | PB1_new | 873 | 955 | IPR000270 | GO:0005515 | |
| Gso15g0247 | 973 | MobiDBLite | consensus disorder prediction | 572 | 603 | - | - | |
| Gso15g0247 | 973 | PANTHER | PLANT REGULATOR RWP-RK FAMILY PROTEIN | 728 | 969 | - | - | |
| Gso15g0247 | 973 | PANTHER | PLANT REGULATOR RWP-RK FAMILY PROTEIN | 7 | 728 | - | - |
Showing 1 to 10 of 18 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso15g0247 | - | - | gmx:100804426 | 1875.91 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso15g0247 | 15 | 2236895 | 2245159 | Gso11g3557 | 11 | 51345905 | 51353230 | GST | |
| Gso15g0247 | 15 | 2236895 | 2245159 | Gso12g0416 | 12 | 3630531 | 3636777 | PCT | |
| Gso15g0247 | 15 | 2236895 | 2245159 | Gso11g1070 | 11 | 9548784 | 9554732 | PCT | |
| Gso12g0416 | 12 | 3630531 | 3636777 | Gso15g0247 | 15 | 2236895 | 2245159 | PCT | |
| Gso11g1070 | 11 | 9548784 | 9554732 | Gso15g0247 | 15 | 2236895 | 2245159 | PCT |
Showing 1 to 5 of 5 entries