Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0237 ATGGGTTCAAATGCAGGAGAAGAATCTACCGTGATCGCCATTGATAGCGACCGGAACAGCCCACACGCCGTCAAGTGGGCTGTGGAACATCTTTTGAAGAAGAACGCTTCTTGCACCCTCATTCACGTTAGAACCAAGACCTTGTATTCACATGATTTTGAGGTTATCCCTAAACAAGGTCGTCCGCCGACAGAAGAAGAATTGCACCATTTTTTTCTTCCCTTTCGAGGATTTTGTGCACGAAAAGGGATCGTAGCTAAGGAGTTAGTCCTGCATGGCATTGACGTTTCAAATGCGCTAACTGATTACATCATTGACAACTCTATCAACAATATCGTTGTTGGCGCTTCCCGCTGGAATGCTTTTATAAGGAAATTTAAAGACGTAGATGTGCCAACAAGCTTAGTCAGGTCTGTGCCAGAGTCTTGCACAGTGCATGTTATATCAAAAGGAAAAGTTCAGAATATTCGACGTGCAGATCATTCTCAAAATATTAGTAACGCACTATCAAAATCTTTGAAAGGTATCAGGGGAAGTTTTCGGTCTGATGAAGATTTAAACAGAAAATCGGTCAAGTATGGACATAGGCAAGGCTCAAACAATGATGGGGCAATGAAGCATGAAAAGTTTACGCAAGAAGATGTAGTTAAAGCTTGGCTTGCTGAAGAGGCTACATTGAGTTTGGCAGAGGTAAAAAGGAAGAAAACCAAGGCAGCAATGGAGTCAGCTGAAATGTCAAAATGCCTAGCAGAAATGAAGAGCCATAAAGGAAAACAAACTGAAATAAGAGCCATGCATGAGGAAGAAGACAGAAATAAAGCATTAAATGCAAGTGCACATAACAAAATTTTATTTAAAAGATACAACATTAAAGAAATTGAAGTTGCAACTAATTACTTTGACAATGCCCTCAAAATCGGTGAAGGTGGTTATGGGCCTGTTTTTAAAGGAGTGCTTGATCACACTGATGTTGCAATCAAGGCCCTCAAACCAGACATATCCCAAGGGGAAAGGCAGTTTCAACAAGAGGTTAATGTTTTGAGCACTATAAAGCATCCAAACATGGTTCAACTTCTAGGTGCCTGTCCAGAGTACGGATGCCTTGTATATGAGTACATTGAAAATGGTAGCTTAGAAGATCGCCTCTTCCAAAAAGATAACACTCCAACAATTCCATGGAAAGTTCGATTCAAAATAGCATCAGAAATTGCCACTGGCCTTCTTTTCCTTCACCAGACAAAGCCTGAGCCGGTTGTGCATCGTGATCTCAAGCCAGCAAACATTTTGTTGGACCGCAACTATGTGAGCAAGATCACTGATGTGGGTTTGGCAAGGCTAGTTCCCCCTAGTGTAGCCAACAAAACCACTCAATACCACAAGACAACTGCAGCTGGTACATTTTGCTACATTGACCCAGAATATCAACAAACAGGACTATTGGGTGTAAAATCAGACATATATTCATTAGGTGTAATGCTGCTACAAATTATCACCGGAAAACCTCCCATGGGTGTCGCACACCTTGTTGAGGAGGCTATAGACAAGGGTAAACTCCTAGAGGTGCTTGATCCAAATGTCAAAGATTGGCCACTTGAAGAGACTTTATCATATGCTAGGTTGGCTTTAAAGTGTTGTGAGATGAGAAAACGGGATAGACCAGACCTTAGTTCTGTCATTTTGCCAGAGCTGAATCGACTCCGAAATCTCGGAGAAGTAGCCATTTACACTGATATTGTACCCGCCAAACAGGTTAGTGACTAA 1761 0.4174 MGSNAGEESTVIAIDSDRNSPHAVKWAVEHLLKKNASCTLIHVRTKTLYSHDFEVIPKQGRPPTEEELHHFFLPFRGFCARKGIVAKELVLHGIDVSNALTDYIIDNSINNIVVGASRWNAFIRKFKDVDVPTSLVRSVPESCTVHVISKGKVQNIRRADHSQNISNALSKSLKGIRGSFRSDEDLNRKSVKYGHRQGSNNDGAMKHEKFTQEDVVKAWLAEEATLSLAEVKRKKTKAAMESAEMSKCLAEMKSHKGKQTEIRAMHEEEDRNKALNASAHNKILFKRYNIKEIEVATNYFDNALKIGEGGYGPVFKGVLDHTDVAIKALKPDISQGERQFQQEVNVLSTIKHPNMVQLLGACPEYGCLVYEYIENGSLEDRLFQKDNTPTIPWKVRFKIASEIATGLLFLHQTKPEPVVHRDLKPANILLDRNYVSKITDVGLARLVPPSVANKTTQYHKTTAAGTFCYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKPPMGVAHLVEEAIDKGKLLEVLDPNVKDWPLEETLSYARLALKCCEMRKRDRPDLSSVILPELNRLRNLGEVAIYTDIVPAKQVSD* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0237 586 SMART serkin_6 300 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0237 586 Gene3D Phosphorylase Kinase; domain 1 277 372 - -
Gso15g0237 586 SUPERFAMILY Protein kinase-like (PK-like) 282 559 IPR011009 -
Gso15g0237 586 Gene3D Transferase(Phosphotransferase) domain 1 373 574 - -
Gso15g0237 586 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 126 - -
Gso15g0237 586 PANTHER OS02G0152300 PROTEIN 206 571 - -
Gso15g0237 586 PANTHER OS02G0152300 PROTEIN 9 178 - -
Gso15g0237 586 Pfam Protein kinase domain 304 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0237 586 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Gso15g0237 586 Pfam Universal stress protein family 11 144 IPR006016 -
Gso15g0237 586 CDD STK_N 9 151 - -
Gso15g0237 586 ProSiteProfiles Protein kinase domain profile. 300 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0237 586 Gene3D HUPs 8 148 IPR014729 -
Gso15g0237 586 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 206 571 - -
Gso15g0237 586 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 9 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0237 Gso-Chr15 2167062 2171685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0237 233 571 Receptor kinase-like Gene Family AT5G12000 65.192 4.60e-167 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso15g0237 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0237 - - gmx:100802306 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0237 15 2167062 2171685 Gso11g3569 11 51422953 51427460 GST
Gso7g0310 7 2843559 2849205 Gso15g0237 15 2167062 2171685 PCT