Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0226 ATGGGTGCTTCGGGAAGGTGGTTTAAGTCACTTCTTCCTTTTAGAAAGACCTCAACTTCAACAACCGATCAAGATAAGGGTGGTGACAACAAGAGTAAGAAGAAGTGGAAGCTATGGAGGGCTTCTTCAGAAGGGTCCATGAAGAAAGTTGGTGGTGGTGGTGGTGGTGCTGCTGCTGCATCTGATTCTTCCCTTACTTATGCGGTGGCCGTGATGGTTCCCAAAGATTTCAAGCTCATCAAGCAGGAATGGGCTGCCATTCGCATTCAGGCTGTGTTTCGAGCCTTCTTGGCTAGACGAGCTTTGAGGGCTTTAAGGGCAGTGGTAAGGCTACAAGCTATTTTTAGAGGCCGGCTAGTCAGGAAGCAAGCAGCTGTTACTCTAAGATGCATGCAGGCTCTTGTTCGAGTTCAGGCGCGAGTGAGGGCAAGGAATGTGAGGAATTCTCCAGAAGGGAAAGCTGTGCAGAAATTACTTGATGAGCATCGCAACCAAGCTGATCCTTTTAATCAAATTGAGCAAGGATGGTGTGATATTCCTGGAACTGTGGATGAAGTTAAAGCAAAGCTACAAATGAGGCAAGAAGGAGCCATCAAGAGGGATAGAGCAATGGCATACTCTCTCTCCACACAGCAGTCAAGACTGTGTGCTAGTCCAAACCCAAAAGCCACTAAGGCAATGACTCCTCTCAAGAATAACAACCTAAGCAATAAGAGCTTAGGATATAGCTTGTTGGAACGCTGGATGGAAGCCAAGCCATGGGAGAGTCCAATCTCAAGGAAGAGTGAAGGCCTTGTTCCTGCTTTTCAATCAAGAAGGAATGGTATGACAACTAGGGTTTCTGTTAAGCCTATTATAACCAGTCAATCCACTTCATCATCTTCGGCCATAAGCTCTGAGTACATGTGTGATGATAATAGCCCTGTGTCAACATCTTATACATCTGGATCTCCATCTTTGCCATCCACCCACACTGCTTTGGTGGAAGCAACAGAGGAAAGAGATGCTCATCAACCAAGCTACATGAGTCTGACAGAATCAACTAAGGCTAAACTGAGAGCTTGCAGGAGTTCTTCACAGAATTCAAAGAGACTTGTTATGGAGGACAGTGTGTCTCACAGCACAACAACAGGCCTTATGAATGGAGATACTAGAAGCTGTTCTGATTCTGATCCTTCAGTTAACTTGTGGAAGGATTCTTGTGCAACAACTCTAAGGGCAAGTTATCAAAAACGACAAATTAGGATATGA 1251 0.4532 MGASGRWFKSLLPFRKTSTSTTDQDKGGDNKSKKKWKLWRASSEGSMKKVGGGGGGAAAASDSSLTYAVAVMVPKDFKLIKQEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRLVRKQAAVTLRCMQALVRVQARVRARNVRNSPEGKAVQKLLDEHRNQADPFNQIEQGWCDIPGTVDEVKAKLQMRQEGAIKRDRAMAYSLSTQQSRLCASPNPKATKAMTPLKNNNLSNKSLGYSLLERWMEAKPWESPISRKSEGLVPAFQSRRNGMTTRVSVKPIITSQSTSSSSAISSEYMCDDNSPVSTSYTSGSPSLPSTHTALVEATEERDAHQPSYMSLTESTKAKLRACRSSSQNSKRLVMEDSVSHSTTTGLMNGDTRSCSDSDPSVNLWKDSCATTLRASYQKRQIRI* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0226 416 SMART iq_5 81 103 IPR000048 GO:0005515
Gso15g0226 416 SMART iq_5 104 125 IPR000048 GO:0005515
Gso15g0226 416 MobiDBLite consensus disorder prediction 26 42 - -
Gso15g0226 416 ProSiteProfiles IQ motif profile. 106 133 IPR000048 GO:0005515
Gso15g0226 416 Gene3D - 80 130 - -
Gso15g0226 416 MobiDBLite consensus disorder prediction 17 53 - -
Gso15g0226 416 MobiDBLite consensus disorder prediction 356 389 - -
Gso15g0226 416 Pfam Protein of unknown function (DUF4005) 310 358 IPR025064 -
Gso15g0226 416 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 412 - -
Gso15g0226 416 ProSiteProfiles IQ motif profile. 82 110 IPR000048 GO:0005515
Gso15g0226 416 PANTHER IQ-DOMAIN 5-RELATED 1 412 - -
Gso15g0226 416 Pfam IQ calmodulin-binding motif 84 103 IPR000048 GO:0005515
Gso15g0226 416 Pfam IQ calmodulin-binding motif 106 123 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0226 Gso-Chr15 2062091 2064793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0226 1 396 IQD Protein Family AT2G26180 45.823 9.06e-93 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0226 - - gmx:100788715 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0226 15 2062091 2064793 Gso11g3582 11 51546036 51549203 GST
Gso15g0226 15 2062091 2064793 Gso7g0070 7 613253 616194 PCT
Gso15g0226 15 2062091 2064793 Gso8g1584 8 15476603 15479518 PCT