Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0224 ATGCGTTCCAGCAACGGTGCATCAAGCAGCAGAGCCTCCAATGCTAACACAGGGCGCCACCCTGTGTACCGTGGAGTGAGGCGTAGGAGTAGTGGCAAATGGGTTTCTGAAATCCGAGAACCCAAAAAACCTAACAGGATTTGGTTAGGGACATTTGCCACCCCTGAAATGGCTGCTATTGCCTATGACGTGGCAGCGCTTGCTCTTAAGGGTAAGGATGCTGAACTCAACTTCCCTAACTCGGCTTCCTCCCTCCCCGTCCCCGCATCATCCGCTGCTCGCGACATTCAGATGGCTGCGGCTAGCGCCGCAGCCGCTGTCGGAGCTGCGAATGATGCACTTGAAGGAAGCCGAGGAGGGAATGCTTCGGTTTCATTGACGGAAGAGTTTTCAGGGGGAAATTTGAACCACTTTGTGGATGAGGACTTGATCTTTGACATGCCGAATATTCTGGTCAATATGGCTGAAGGAATGCTACTGAGTCCTCCTCGTTTTGATAATTTTGCTGCTACCGACTATGAATACATGGATGAAGATCCTAACCTCTGGGGGTTTCCTAATTACTAG 567 0.5115 MRSSNGASSSRASNANTGRHPVYRGVRRRSSGKWVSEIREPKKPNRIWLGTFATPEMAAIAYDVAALALKGKDAELNFPNSASSLPVPASSAARDIQMAAASAAAAVGAANDALEGSRGGNASVSLTEEFSGGNLNHFVDEDLIFDMPNILVNMAEGMLLSPPRFDNFAATDYEYMDEDPNLWGFPNY* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0224 188 Pfam AP2 domain 21 71 IPR001471 GO:0003700|GO:0006355
Gso15g0224 188 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF024 4 186 - -
Gso15g0224 188 MobiDBLite consensus disorder prediction 1 31 - -
Gso15g0224 188 SUPERFAMILY DNA-binding domain 22 81 IPR016177 GO:0003677
Gso15g0224 188 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Gso15g0224 188 PRINTS Ethylene responsive element binding protein signature 61 81 IPR001471 GO:0003700|GO:0006355
Gso15g0224 188 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Gso15g0224 188 MobiDBLite consensus disorder prediction 1 17 - -
Gso15g0224 188 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
Gso15g0224 188 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Gso15g0224 188 Gene3D AP2/ERF domain 22 80 IPR036955 GO:0003700|GO:0006355
Gso15g0224 188 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 4 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0224 Gso-Chr15 2041363 2042496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0224 12 186 AP2-EREBP Transcription Factor Family AT2G36450 62.983 5.88e-59 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso15g0224 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0224 - - gmx:100799620 328.561