Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0216 ATGGAATTGCAGCTTATTTTCCTGCTAATTAAGCTACATTTTGTTATATGTATTCCCCAGCTTCATGAATATGCTGCCACTTATCTGCACCATTCGAGAATCAGAAGCCCTTCAAGTATTGCATTCCCGCCATCAGAATCACTTTCTGGACTTCCTCATAGTATTGCACTTCCACCTTCCAAGGCATCTTCTAGAAATGCCGGAAGTATTGCACTTTCACCTTCCAAATCATTCCCCAAAATGAAATGGACGCACAGTTCTATGGACTCTCCAATATCACACCATAAGCATCACCATTCCAGAAGAAAGTCCAACAACCAAGTTCCTGGCCCAACCTATCCAATCCACCCTCATACTCATCAAGGTTCTCCAGTCTTCAAATATCAACATTCATTCTCTTCACCTATGAGCCTGCGTTTAAATGCACCCACATCAGCACCAGCACCAGCACCTGCATCATCACCAACAGTTCTATCACACCACTTGAATGTACCCTCTCCTTCACCTAGAATTTCACCTCCAGGTTCATCATTGAAGAAGACAGAGACTCCACCACCAGCATATACTTTGGTTCTACCATCTCCACCACCTAACAAAGATTGTATATCGGTGACTTGCTCTGAGCCCTTGACATATACACCTCCTGGATCACCTTGTGGTTGTGTGTGGCCACTTCAAGTTAAACTTCGCATCAACATTGCAATATACAAGTTTTTTCCTTTGGTTTCCAAGCTTGCCAATGAAATTGCTGCTAGTGTTTTGCTGAACCATAATCAAGTACGCGTTGTGGGAGCTGATGCAACTAGCCAGCAGCTCGAGAAAACCATTGTTCTCATAAATTTGGTACCTCAAGGAGTGAAGTTTGATGACACAACTGCATTTTTAATATATAAGAAATTCTGGCAGAGAGAGGTTCTCAATGATGCTTCTGCCTTTGGTGACTATGAAGTGCTCTATGTTCATTATCCAGGCCTTCCACCATCTCCACCTTCAAATGTTCACGGTATAGATGTTGAACCATACCCTGGTCGCAGGAACGATGGAACAATAGTGAAACCTTTAGGAGTAGATGTCTCAGGGAAGAAAAAAGAAGGGAGTGGTGGAAGAATGGTTATTATGATCGTGCTGTCATCTTTTGCTGCCTTTGTTCTATTCATTGGAGTTGCCTGGCTTTGTCTCTTGAAATGTGGTTCCTGCACTCTTGAACCTGAACAAATTCCAGATGTCAAAATTCCATTCTCTTCAAAGCGATCAGCAGGGACTGCCAGTGCAAGGGCATTGAATTATGGGAGCATGCCGGGTTCTAGATCAATGTCCTTCAATTCTGGAACAATAATATATACAGGATCAGCTAAAATATTTACTTTGAATGAAATAGAGAAAGCAACAAATAACTTCGATTCTTCAAGAATATTAGGAGAAGGTGGCTTCGGTCTTGTTTACAAAGGTGACCTAGATGACGGCAGGGATGTGGCAGTGAAGATTCTCAAAAGAGAGGACCAGCATGGAGACCGTGAATTCTTTGTAGAAGCTGAGACGCTTAGCTGCTTGCACCATAGAAATTTAGTTAAATTGATAGGTTTATGCACAGAGAAACAAACTCGCTGCTTAGTCTACGAGCTTGTCCCTAATGGCAGCGTTGAATCCCACTTACATGGTGCTGACAAGGAAACCGAGCCACTTGATTGGGATGCACGGATGAAGATTGCACTTGGTGCAGCTAGGGGATTGGCTTATCTGCATGAAGATTGTAATCCATGTGTCATACATAGGGACTTCAAATCCAGCAACATCTTGTTGGAATATGATTTTACACCCAAAGTTTCAGATTTTGGATTGGCTAGAACAACACTGAACGAGGGAAGCAACCACATCTCAACACATGTCATTGGAACATTTGGCTACGTAGCTCCTGAATATGCAATGACCGGCCATCTTCTTGTGAAAAGTGATGTTTACAGCTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAGCCTGTGGATTTGTCACAGCCACCAGGTCAAGAAAACCTTGTTGCTTGGGCTCGTCCACTTCTTACAAGTAAGGAGGGTTTGCAGAAGATCATAGACCCAATTATAAAACCCGTTTTTTCTGTCGATACCATGGTAAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTCACTCAACGTCCTTTCATGGGTGAAGTTGTTCAGGCATTGAAGCTGGTATGCAGTGAGTTTGAGGAAACAAGTTATGTAAGACTGAAAAGCTTTCGAGAAGATGATCTTGCAACCAGTGTTCCAGGTGAGAGAGTGGGAATTTCAGAGTGTAACATAACACTGCCTCAGCCTGGTTAA 2355 0.4293 MELQLIFLLIKLHFVICIPQLHEYAATYLHHSRIRSPSSIAFPPSESLSGLPHSIALPPSKASSRNAGSIALSPSKSFPKMKWTHSSMDSPISHHKHHHSRRKSNNQVPGPTYPIHPHTHQGSPVFKYQHSFSSPMSLRLNAPTSAPAPAPASSPTVLSHHLNVPSPSPRISPPGSSLKKTETPPPAYTLVLPSPPPNKDCISVTCSEPLTYTPPGSPCGCVWPLQVKLRINIAIYKFFPLVSKLANEIAASVLLNHNQVRVVGADATSQQLEKTIVLINLVPQGVKFDDTTAFLIYKKFWQREVLNDASAFGDYEVLYVHYPGLPPSPPSNVHGIDVEPYPGRRNDGTIVKPLGVDVSGKKKEGSGGRMVIMIVLSSFAAFVLFIGVAWLCLLKCGSCTLEPEQIPDVKIPFSSKRSAGTASARALNYGSMPGSRSMSFNSGTIIYTGSAKIFTLNEIEKATNNFDSSRILGEGGFGLVYKGDLDDGRDVAVKILKREDQHGDREFFVEAETLSCLHHRNLVKLIGLCTEKQTRCLVYELVPNGSVESHLHGADKETEPLDWDARMKIALGAARGLAYLHEDCNPCVIHRDFKSSNILLEYDFTPKVSDFGLARTTLNEGSNHISTHVIGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWARPLLTSKEGLQKIIDPIIKPVFSVDTMVKVAAIASMCVQPEVTQRPFMGEVVQALKLVCSEFEETSYVRLKSFREDDLATSVPGERVGISECNITLPQPG* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0216 784 ProSiteProfiles Protein kinase domain profile. 466 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0216 784 MobiDBLite consensus disorder prediction 83 183 - -
Gso15g0216 784 CDD STKc_IRAK 472 740 - -
Gso15g0216 784 Gene3D Transferase(Phosphotransferase) domain 1 542 759 - -
Gso15g0216 784 PANTHER OS01G0750732 PROTEIN 7 763 - -
Gso15g0216 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Gso15g0216 784 ProSitePatterns Protein kinases ATP-binding region signature. 472 494 IPR017441 GO:0005524
Gso15g0216 784 PANTHER OS01G0750732 PROTEIN 7 763 - -
Gso15g0216 784 Pfam Protein tyrosine and serine/threonine kinase 469 739 IPR001245 GO:0004672|GO:0006468
Gso15g0216 784 MobiDBLite consensus disorder prediction 124 141 - -
Gso15g0216 784 Gene3D Phosphorylase Kinase; domain 1 438 541 - -
Gso15g0216 784 SUPERFAMILY Protein kinase-like (PK-like) 445 739 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0216 Gso-Chr15 1962762 1968526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0216 198 769 Receptor kinase-like Gene Family AT5G56890 61.512 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Gso15g0216 PK_Tyr_Ser-Thr 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0216 - - gmx:100798578 1557.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0216 15 1962762 1968526 Gso11g3595 11 51643715 51649289 GST
Gso15g0216 15 1962762 1968526 Gso7g0084 7 732032 737994 PCT
Gso15g0216 15 1962762 1968526 Gso8g1597 8 15619037 15625338 PCT
Gso7g0084 7 732032 737994 Gso15g0216 15 1962762 1968526 PCT
Gso8g1597 8 15619037 15625338 Gso15g0216 15 1962762 1968526 PCT