Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0205 ATGGGGGAAGGTAGTACTAGTACTAGAGATATGAGCACCGATAAAATAAATGTTGATTTAAATGAATATCCAATTGAAGATATTTCTTTAGAGAATGGTTATTCAGGAACAGTTAGTGAACATTTTGATCATGATATTGTGGCAAATGATAAGAAAGTTGATAGAGATGAAACTTATAATGAGACAAATATTGTTCCTTTTGTTGGTCAAATTTTTCTTAGCGAGGAAGAAGCATTTGCATTTTATAAGAGGTATGCATATCAGCATGGGTTCTCTGTTCGAAAAGGTAGATTCATCAAACGAAATGGAATTATGAGGAGGTGTGATTTTTTTTGCCATCGTGAAGGTAGAAGCTCGTTGAAAATCATAGAACCATTAAAAGAACAGAGAAACAGAGAATCAACAAGGTGTGAATGTAAAGCTTATTTAAGAATTTCATTGCAGAAGTCTCATGATATATTTCCAAGTGAGTGGCGAGTTACAAAGTTTGTTGTTGAACATAACCATGTTTTGCTAACCCAATCAGAAGTGCGTTTTTTACCGGCTAACCGAACTATCTCTGAAGATGATATTGAACGCATTTTCTTGTTAAAAGAAGGGGGGCTTTCAGTTAGACAATTGATGCGTGTCATAGAATTAGAGAAAAATGTGAAGCATGGTTATCTTCCATTTATTGAAAGGGACATTCGTAATCTTTTTGTGAAAACCAAGAAAAAAGTTGAAAGAAATGATGCCAAAGATCTTCTCAAGTACTGTGAGGATGCAAAAAAGAGTTGCTCTAAATTTCAGTATGCATATACACTTGATGAAGAGAGAAGGTTAGAGCATATTTTTTGGTCTCCTGCTTCTTGCTCTGATTGGTACCAAAAATATGGTGATGTTGTTGTGTTTGATACTACATACAAGGTCAATTCTTATGAAATGCCATTTGGGATTTTTGTGGGTATGAATAGTCATGGGAAGACTGTACTTTTTGGTTGTGCACTCTTACGAAATGAAACAATATCTGCATTTCGTTGGTTAATGAAGACTTTTATATCTTTGATGAAGAAGCCACCAAAGACTATACTAACGGATCAAGATCCATGGATGAAAGAAGCAATTTCAAAAGACTTGCCATCAACAAAACATAGTTTTTGCATATGGCACATCACTTTTAAGTTTAGTAGTTGGTTTAATGCTATACTTCGGGACAAATATTCAAAATGGTGTTCTGATTTTTACGAGTTGTATAAATTGGAGACATGTGAAGAATTTGAGCATCAATGGCCAAAAGTTGTTGCTAAGTATAACTTGCAGTCAAATAAACATGTGAAAGGATTGTATGAAATCAGGAATTACTGGGCACTCGCTTATCTTCGTGACCATTTCTTTGGTGGGATGACAACTACCGGAAGATCAGAGAGTATTAATGCATTTATTAAAAGATTTATAAATTCTCACACAAGTTTAAGTGACTTTACAAAGCAGGTTGATGTAGCGATTGATGATATTAAGCAAAAAGAAGACCATGACATAATGTTAGAAAAGTGCAAAAGAATTAACTTGAAGCTTATGTCACCCTTGCAAGAGCAAGCTCATGGTGTTCTTACAAGATTTGCTTTTCAGAAGTTTCAAGAGGAGTTTGAAAGGTCCACCCAATATTCAATTCATCATGAAAATGGTAATGAATTTGTGTTGCGGTATTATAAAGATGCTAATAGTAGAAAACACATGGTCTTTTGGGATGGTAAAATAGCTACATGTAGTTGCAAGTATTTTGAGTTTTGGGGTATATTATGTCGTCACATTCTCAGTATTTTTCTTCATAAAGATTGTCATGAAATCCCTTCTAACTACTTGCCGTCACGATGGCGGCTTCAAACATCACATGACGATGATGAAGTAGATCCCCAACAAGTCAATGTTGTCTTTGAGGAACAAGTCGATGTTGTTCACTGTCCTCCACCTTCCAAAACAAAAGGTCGTCCCAAACGAAGACGTCTTAAAGGTGGAAAAGAGCTATCACATAACATGAATACTTGTGGATTGTGCAAAGATGTAGGACATAATATTGTTACATGTCCTCTAAAAGAAAATACTCAATTTTCTGGTCACACAAACAAGAAGAAAAAAATTTGTAAAGATGCAAATTTAAATCCAATTCTTCTTCCAAAAGTTTAG 2163 0.3472 MGEGSTSTRDMSTDKINVDLNEYPIEDISLENGYSGTVSEHFDHDIVANDKKVDRDETYNETNIVPFVGQIFLSEEEAFAFYKRYAYQHGFSVRKGRFIKRNGIMRRCDFFCHREGRSSLKIIEPLKEQRNRESTRCECKAYLRISLQKSHDIFPSEWRVTKFVVEHNHVLLTQSEVRFLPANRTISEDDIERIFLLKEGGLSVRQLMRVIELEKNVKHGYLPFIERDIRNLFVKTKKKVERNDAKDLLKYCEDAKKSCSKFQYAYTLDEERRLEHIFWSPASCSDWYQKYGDVVVFDTTYKVNSYEMPFGIFVGMNSHGKTVLFGCALLRNETISAFRWLMKTFISLMKKPPKTILTDQDPWMKEAISKDLPSTKHSFCIWHITFKFSSWFNAILRDKYSKWCSDFYELYKLETCEEFEHQWPKVVAKYNLQSNKHVKGLYEIRNYWALAYLRDHFFGGMTTTGRSESINAFIKRFINSHTSLSDFTKQVDVAIDDIKQKEDHDIMLEKCKRINLKLMSPLQEQAHGVLTRFAFQKFQEEFERSTQYSIHHENGNEFVLRYYKDANSRKHMVFWDGKIATCSCKYFEFWGILCRHILSIFLHKDCHEIPSNYLPSRWRLQTSHDDDEVDPQQVNVVFEEQVDVVHCPPPSKTKGRPKRRRLKGGKELSHNMNTCGLCKDVGHNIVTCPLKENTQFSGHTNKKKKICKDANLNPILLPKV* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0205 720 Pfam MULE transposase domain 294 385 IPR018289 -
Gso15g0205 720 ProSiteProfiles Zinc finger SWIM-type profile. 562 605 IPR007527 GO:0008270
Gso15g0205 720 SMART 26again6 580 607 IPR006564 GO:0008270
Gso15g0205 720 Pfam SWIM zinc finger 573 604 IPR007527 GO:0008270
Gso15g0205 720 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 62 620 IPR031052 GO:0006355
Gso15g0205 720 Pfam FAR1 DNA-binding domain 81 172 IPR004330 -
Gso15g0205 720 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 62 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0205 Gso-Chr15 1840577 1843127 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso15g0205 MULE 1.3e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0205 - - gsj:114409893 1452.19