Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0196 ATGAGAATGTCGAGGAGTTTCCTAGTTGCTTTTCTAGGATTTCTAGTTCTTGCCGTTCTGATTCAAGCTCAGGATCAATCAGGATTCATCAGCATAGCTTGCGGAGCTCCTGCAGGTGTGAACTTTACTGTGCGGCAAACAGGCTTAAACTATACATCAGATGCAAATTTCATAAATACTGGTGTGAGCAGGACAATAGTACCTGAACTCAGACATGAGTTTCTAAGAAACGTGTGGAATCTCAGAAGCTTCCCGGAAGGAAAAAGGAACTGCTACAAAATAAACATCACAAGAGGCTCCAAGTATCTGATCGGGGCTTCTTTTTTGTACGGAAATTATGATGGCTTAAATATGTTACCAAAGTTTGATCTTCTTCTCGGGGCTAACCGGTGGGATACAGTGGACATAAAAAATGCATCCGTTAGCCGACATTTTGAGATCATATATGTACCTTCACTGGATTACGTACATATCTGTATGGTTGACACAGGCCTTGGGACACCATTTATATCAGCTATAACGTTGAGGTCTTTGAGAAATGACATTTATGAAACTGAATTTGGATCATTGCAAACGTACATCCGTCGGGATTTAGGTTCAAACAAAGGCTACAGGTACGACGATGATGTTTATGATCGTTACTGGAGCTATGACGATGCAGATACATGGTATGACAATGTAGATAAATGGAAACAGCTAAATTTTCCGATTGATGCTGATTCTTTAGTGCAGAACCATTACCAACCGCCAGCTGTTGTCATGAGCACCGCAGTTACACCAGCAAATGTTAGTGCTCCATTGGTAATAAGCTGGAAGCCATATGATCCAAAAGAGTCATTCTATGTTTACATGCACTTCACAGAGATTCAAGTGTTAGCAAAGAATCAGACGAGAGAGTTCAACATCACCCTGAACGGAAAGCTATGGTATGAAAATGAGTCTCCTAGGTACCACAGTGTCAATACTATATATAGCACTTCAGGCATCAGTGGGAAATTAATTAATTTTTCATTTGTGATGACCGAGACTTCTACCCTACCTCCCATCATCAATGCCATTGAAATTTACAGAGTGAAAGAGTTCCCGCAACAAGACACATACCAAGGAGATGTTGATGCGATTACAACCATCAAGTCTGTTTATGGGGTGACAAGAGATTGGCAAGGTGATCCATGCAGCCCGAAAGACTACTTGTGGGAGGGTCTGAATTGTACGTATCCCGTAATTGACTCCCCAAGAATCATAACTTTGAACTTATCTTCAAGTGGATTGTCAGGAAAGATAGGCCCTTCAATTTTAAATCTCACCATGCTGGAGAAGTTGGATTTATCAAACAATAGCTTAAACGGTGAAGTTCCTGATTTTCTGTCTCAATTACAATACTTGAAGATCTTGAACTTGGAGAATAATAACCTCTCCGGTTCAATTCCCTCAACACTTGTTGAAAAATCTAAGGAAGGTTCCCTATCATTAAGTGTGGGCCAAAATCCATATCTATGTGAATCTGGTCAATGCAATTTCGAGAAGAAACAGAAGAACATTGTTACGGCGCCCATAGTAGCATCAATTAGTGGGGTGTTGATTCTTCTTGTAGCCGTGGCAATATTGTGGACCCTTAAAAGGAGAAAATCAAAAGAAAAATCAACAGCTTTGATGGAAGTGAATGATGAAAGTGAGATCTCACGCCTGCGATCCACAAAAAAAGATGATTCATTAGCGCAAGTCAAAAAACAAATATATTCATACTCTGACGTCCTTAAAATCACCAACAATTTCAATACAATTATTGGTAAAGGAGGATTTGGAACAGTTTACCTGGGCTATATCGATGACAGTCCAGTTGCAGTGAAAGTGCTTTCTCCATCGTCTGTAAATGGCTTTCGACAATTTCAAGCAGAGGTTAAACTTCTAGTCAGAGTTCATCACAAAAACTTAACATCCCTTATTGGTTATTGCAATGAAGGAACCAATAAGGCTCTCATATATGAGTATATGGCTAATGGGAACTTACAAGAACATCTCTCTGGTAAACACAGCAAATCAACGTTCTTGAGCTGGGAGGACAGACTTCGTATAGCAGTGGATGCAGCCTTAGGATTGGAGTATCTGCAAAATGGTTGCAAGCCTCCAATAATCCACAGAGATGTAAAATCTACAAACATCTTGTTGAATGAACACTTCCAAGCAAAATTGTCAGATTTTGGTCTATCCAAAGCTATCCCAACTGATGGGGAATCTCACGTGTCAACTGTCGTTGCTGGTACTCCTGGTTATCTGGACCCTCACTGCCACATATCCAGTAGATTAACACAGAAAAGCGATGTTTTTAGCTTTGGAGTAGTTCTTTTGGAAATAATCACAAACCAACCAGTAATGGAAAGGAATCAAGAAAAGGGTCACATAAGTGAAAGGGTTAGCTCCTTGATTGAGAAAGGAGATATCAGGGCCATAGTTGACTCAAGGTTAGAAGGAGATTATGACATTAACTCAGCTTGGAAAGCCTTAGAAATAGCAATGGCTTGTGTTTCTCTAAATCCCAACGAAAGGCCAATCATGAGTGGGATTGCTATTGAACTAAAGGAGACATTAGCGATCGAAATAGCTCGAGCAAAACATTGTGATGCCAATCCCAGATATTTAGTTGAAGCGGTTAGCGTGAATGTGGACACCGAATTCATGCCCCTGGCGAGGTAG 2694 0.4046 MRMSRSFLVAFLGFLVLAVLIQAQDQSGFISIACGAPAGVNFTVRQTGLNYTSDANFINTGVSRTIVPELRHEFLRNVWNLRSFPEGKRNCYKINITRGSKYLIGASFLYGNYDGLNMLPKFDLLLGANRWDTVDIKNASVSRHFEIIYVPSLDYVHICMVDTGLGTPFISAITLRSLRNDIYETEFGSLQTYIRRDLGSNKGYRYDDDVYDRYWSYDDADTWYDNVDKWKQLNFPIDADSLVQNHYQPPAVVMSTAVTPANVSAPLVISWKPYDPKESFYVYMHFTEIQVLAKNQTREFNITLNGKLWYENESPRYHSVNTIYSTSGISGKLINFSFVMTETSTLPPIINAIEIYRVKEFPQQDTYQGDVDAITTIKSVYGVTRDWQGDPCSPKDYLWEGLNCTYPVIDSPRIITLNLSSSGLSGKIGPSILNLTMLEKLDLSNNSLNGEVPDFLSQLQYLKILNLENNNLSGSIPSTLVEKSKEGSLSLSVGQNPYLCESGQCNFEKKQKNIVTAPIVASISGVLILLVAVAILWTLKRRKSKEKSTALMEVNDESEISRLRSTKKDDSLAQVKKQIYSYSDVLKITNNFNTIIGKGGFGTVYLGYIDDSPVAVKVLSPSSVNGFRQFQAEVKLLVRVHHKNLTSLIGYCNEGTNKALIYEYMANGNLQEHLSGKHSKSTFLSWEDRLRIAVDAALGLEYLQNGCKPPIIHRDVKSTNILLNEHFQAKLSDFGLSKAIPTDGESHVSTVVAGTPGYLDPHCHISSRLTQKSDVFSFGVVLLEIITNQPVMERNQEKGHISERVSSLIEKGDIRAIVDSRLEGDYDINSAWKALEIAMACVSLNPNERPIMSGIAIELKETLAIEIARAKHCDANPRYLVEAVSVNVDTEFMPLAR* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0196 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 711 723 IPR008271 GO:0004672|GO:0006468
Gso15g0196 897 SMART serkin_6 590 865 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0196 897 Gene3D Ribonuclease Inhibitor 372 491 IPR032675 -
Gso15g0196 897 ProSitePatterns Protein kinases ATP-binding region signature. 596 617 IPR017441 GO:0005524
Gso15g0196 897 Pfam Protein tyrosine and serine/threonine kinase 592 856 IPR001245 GO:0004672|GO:0006468
Gso15g0196 897 PANTHER PUTATIVE-RELATED 14 894 - -
Gso15g0196 897 Gene3D Phosphorylase Kinase; domain 1 573 664 - -
Gso15g0196 897 SUPERFAMILY L domain-like 383 481 - -
Gso15g0196 897 Pfam Malectin-like domain 32 358 IPR024788 -
Gso15g0196 897 Gene3D Transferase(Phosphotransferase) domain 1 665 878 - -
Gso15g0196 897 CDD STKc_IRAK 596 861 - -
Gso15g0196 897 PANTHER OS07G0107800 PROTEIN-RELATED 14 894 - -
Gso15g0196 897 SUPERFAMILY Protein kinase-like (PK-like) 574 856 IPR011009 -
Gso15g0196 897 ProSiteProfiles Protein kinase domain profile. 590 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0196 Gso-Chr15 1709262 1719113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0196 1 897 Receptor kinase-like Gene Family AT1G51800 48.242 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso15g0196 Malectin_like 1.2e-108 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0196 - - gmx:100170722 1661.74