Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0195 ATGGGAATGTCCAGGAGTTTCCTAGTTGCTTTTCTAGGATGTCTACTTCTTGCCGTTCTCATTCAAGCACAGGATCAATCAGGATTCATCAGCATAGCTTGCGGAGCTCCTGCAGGTGTGAACTTTACTGTGCCGAAAACAGGCTTAAACTATACATCAGATGCAAATTTCATAAATACTGGTGTGAGCAGGACAATAGTACCTGAACTCAGAGATCAGTTTCAAAGATACGTGTGGAATCTCAGAAGCTTCCCGGAAGGAAAAAGGAACTGCTACAAAATAAACATCACAAGAGGCTCCAAGTATCTGATCGGGGCTTCTTTTTTGTACGGAAATTATGATGGCTTAAATATGTTACCACAGTTTGATCTTCTTCTCGGGGCTAACCGGTGGGATACAGTGAAAATAAAAAATGCATCCGTTGGTCGATATTTTGAGATCATATATGTACCTTCACTGGATTACGTACATATCTGTATGGTTGACACAGGCCGTGGGACACCATTTATATCAGCTATAGAGTTGAGGTCTTTGAGAAATGACATTTATGAAACTCGATTTGGATCATTGGAAAAGTACACCCGTCGGGATTTAGGTTCAAACGAAGACTACAGGTACCACTATGATGTTTATGATCGTTTCTGGAGCTATGACGACGTAGATACATGGTATGACAATGTAGATAAATGGAAACAGCTAAATTTTCCGATTGATGCTGATTCTTTAGTGCAGAACGAATACCAACCGCCAGCTGTTGTCATGAGCACCGCAGTTACACCAGCAAATGTTAGTGCTCCATTGGTAATAAGCTGGAAGCCATATGATCCAAAAGAGTCATTCTATGTTTACATGCACTTCACAGAGATTCAAGTGTTAGCAAAGAATCAGACGAGAGAGTTCAACATCACCCTGAACGGAAAGCTATGGTATGAAAATGAGTCTCCTAGGTACCACAGTGTCTTTACTAGATATACCCCTAAAGGCATCAGTGGGAAATTAATTAATTTTTCATTTGTGATGACCGAGACTTCTACCCTACCTCCCATCATCAATGCCATTGAAATTTACAGAGTGAAAGAGTTCCCGCAACCAGACACCTACCAAGGAGATGTTGATGCGATCACAACCATCAAGTCTGTTTATGGGGTGACAAGAGATTGGCAAGGTGATCCATGCAGCCCGAAAGACTACTTGTGGGAGGGTCTGAATTGTACGTATCCCGTAGTTGACTCCCCAAGAATCATAACTTTGAATTTATCTTCAAGTGGATTGTCAGGAAAGATAGACCCTTCAATTTTAAATCTCACCATGTTGGAGAAGTTGGATTTATCAAACAATAGCTTAAACGGTGAAGTTCCTGATTTTCTGTCTCAATTACAATACTTGAAGATCTTGAACTTGGAGAATAATAACCTCTCCGGTTCAATTCCCTCAACACTTGTTGAAAAATCTAAGGAAGGTTCCCTATCATTAAGTGTGGGCCAAAATCCATATCTATGTGAATCTGGTCAATGCAATTTCGAGAAGAAACAGAAGAACATTGTTACGGCGCCCATAGTAGCATCAATTAGTGGGGTGTTGATTCTTCTTGTAGCCGTGGCAATATTGTGGACCCTTAAAAGGAGAAAATCAAAAGCTTTGATGGTAGAAAAGGATCAACATGAGGTGTCACTGCAATACATAGAACAAGATGATTCATTACTGCAATTCAGAAAACAAATATATTCATACTCTGATGTCCTTAAAATCACCAACAATTTCAATACAGTTGTTGGTAAAGGTGGGTTCGGAACAGTATATTTGGGCCATATCAATGACACTCCAGTTGCAGTGAAAATGCTTTCCCGGTCTTCTGCTCATGGTTACCAACAATTCCAAGCTGAAGTTAAGCTTCTAATGACAGTTCATCATAGAAATCTGACCTCCCTTGCTGGTTATTGTAATGAAGGAACCAATAAGGGGCTCATATATGAGTACATGGCTAATGGAAACTTAAACGAACATCTCTCAGAACTTGATTCTGCAGGTAAACACAGCAAAACAAAATTCTTGACCTGGGAAGACAGACTTCGTATTGCAGTGGATGCAGCCTTAGGATTGGAGTATCTGCACAATGGTTGCAAACCACCTATTATTCACAGAGACATAAAATCTACAAACATCTTGCTGAATGAACACTTCCATGCAAAATTATCTGATTTTGGTCTATCCAAAATTATGCCAACAGACGGGGTAACTCATGTGTCAACTGTTATTGCTGGTACTCCTGGTTATCTGGACCCTGATTACTGTATATCCAATAGAGTAACAGAGAAGAGTGATGTTTATAGCTTCGGTATTGTTCTTTTGGAGATAATCACAAGGCAACCCGTGATAGCGAGGAGTCAAGAAAATATCCACATAAGTGAATGGGTTAGTTCCTTGATTGCTAAAGAGGATATCAAGGCCATTGTTGACTCAAGGTTAGGAGGAGATTTTGATAGTAATTCAGCTCGGAAAGTCATAAAATTAGCAATGGCTTGTATTTCTCCAAAGCCCAACGAAAGGCCAATGATGAAGATAGTAGTGACTGAACTAATGGAGACTTTATCAACCGAATTAGCTCGAACGAATATGGACATCGAACTCACCATGCCGAGGTAA 2643 0.4014 MGMSRSFLVAFLGCLLLAVLIQAQDQSGFISIACGAPAGVNFTVPKTGLNYTSDANFINTGVSRTIVPELRDQFQRYVWNLRSFPEGKRNCYKINITRGSKYLIGASFLYGNYDGLNMLPQFDLLLGANRWDTVKIKNASVGRYFEIIYVPSLDYVHICMVDTGRGTPFISAIELRSLRNDIYETRFGSLEKYTRRDLGSNEDYRYHYDVYDRFWSYDDVDTWYDNVDKWKQLNFPIDADSLVQNEYQPPAVVMSTAVTPANVSAPLVISWKPYDPKESFYVYMHFTEIQVLAKNQTREFNITLNGKLWYENESPRYHSVFTRYTPKGISGKLINFSFVMTETSTLPPIINAIEIYRVKEFPQPDTYQGDVDAITTIKSVYGVTRDWQGDPCSPKDYLWEGLNCTYPVVDSPRIITLNLSSSGLSGKIDPSILNLTMLEKLDLSNNSLNGEVPDFLSQLQYLKILNLENNNLSGSIPSTLVEKSKEGSLSLSVGQNPYLCESGQCNFEKKQKNIVTAPIVASISGVLILLVAVAILWTLKRRKSKALMVEKDQHEVSLQYIEQDDSLLQFRKQIYSYSDVLKITNNFNTVVGKGGFGTVYLGHINDTPVAVKMLSRSSAHGYQQFQAEVKLLMTVHHRNLTSLAGYCNEGTNKGLIYEYMANGNLNEHLSELDSAGKHSKTKFLTWEDRLRIAVDAALGLEYLHNGCKPPIIHRDIKSTNILLNEHFHAKLSDFGLSKIMPTDGVTHVSTVIAGTPGYLDPDYCISNRVTEKSDVYSFGIVLLEIITRQPVIARSQENIHISEWVSSLIAKEDIKAIVDSRLGGDFDSNSARKVIKLAMACISPKPNERPMMKIVVTELMETLSTELARTNMDIELTMPR* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0195 880 SUPERFAMILY L domain-like 381 482 - -
Gso15g0195 880 Pfam Leucine Rich Repeat 462 480 IPR001611 GO:0005515
Gso15g0195 880 Pfam Malectin-like domain 32 358 IPR024788 -
Gso15g0195 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 711 723 IPR008271 GO:0004672|GO:0006468
Gso15g0195 880 SMART serkin_6 585 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0195 880 Pfam Protein tyrosine and serine/threonine kinase 587 859 IPR001245 GO:0004672|GO:0006468
Gso15g0195 880 Gene3D Ribonuclease Inhibitor 372 491 IPR032675 -
Gso15g0195 880 CDD STKc_IRAK 591 861 - -
Gso15g0195 880 ProSitePatterns Protein kinases ATP-binding region signature. 591 612 IPR017441 GO:0005524
Gso15g0195 880 PANTHER OS07G0107800 PROTEIN-RELATED 15 871 - -
Gso15g0195 880 ProSiteProfiles Protein kinase domain profile. 585 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0195 880 SUPERFAMILY Protein kinase-like (PK-like) 569 859 IPR011009 -
Gso15g0195 880 Gene3D Transferase(Phosphotransferase) domain 1 660 876 - -
Gso15g0195 880 Gene3D Phosphorylase Kinase; domain 1 568 659 - -
Gso15g0195 880 PANTHER PUTATIVE-RELATED 15 871 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0195 Gso-Chr15 1678129 1697903 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0195 1 877 Receptor kinase-like Gene Family AT1G51800 49.103 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso15g0195 Malectin_like 1.5e-109 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0195 - - gmx:100170722 1479.15