Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0194 ATGCGAATGTCCCGGAGTTTCCTAGTTGCTTTTCTAGGATGTCTACTTCTTGCCGTTCCAATTCAAGCTCAGGATCAATCAGGATTCGTCAGCATAGCTTGCGGAGCTCCTGCAGGTGTGAACTTTACTGTGCTGGAAACAGGCTTAAACTATACATCAGATGCAAATTTCATAAATACTGGTGTGAAGAGCACAATAGTATCTGAACTCAGAGATCAGTTTCAAAGACACATGTGGAATCTCAGAAGCTTCCCGGAAGGAAAAAGGAACTGCTACAAAATAAACATCACAAGAGGCTCCAAGTATCTGATCAGGGCTTTTTTTTTGTACGGAAATTATGATGGCTTAAATATGTTACCACAGTTTGATCTTCTTCTCGGGGCTAACCGGTGGCGTACAGTGAACATAAAAAATGCATCCGTTAGCCAATCTTTTGAGATCATATATGTACCTTCACTGGATTACGTACATATATGTATGGTTGACACAGGCCTTGGGACACCATTTATATCAGCTATAGAGTTGAGGTCTTTGAGAAATAACATTTATAAAACTGAATTTGGATCATTGGAAACGTACATCCGTCGGGATTTAGGTTCAAACAAAGGCTACAGGTACGACGATGATGTTTATGATCGTTACTGGAGCAATGACGATGCAGATACATGGTATGACAATGTAGATAAATGGAAACAGCTAAATTTTCCGATTGATGCTGATTCTTTAGTGCAGAAACATTACCAACCGCCAGCTGTTGTCATGAGCACCGCAGTTACACCAGCAAATGTTAGTGCTCCATTGGTAATAAGCTGGGAGCCATATGATCCAAAAGAGTCATTCTATGTTTACATGCACTTCACAGAGATTCAAGTGTTAGCAAAGAATCAGACGAGACAGTTCAACATCACCCTGAACGGAAACCTATTGTATGGAAATATGTCTCCTAGGTACCACAGTGTCCGAACTATATATACCACTTCAGGCATCAGTGGGAAATTAATTAATTTTTCATTTGTGATGACCGAGACTTCTACCCTACCTCCCATCATCAATGCCATTGAAATTTACAGAGTGAAAGAGTTCCCGCAACAAGACACATACCAAGGAGATGTTGATGCGATTACAACCATCAAGTCTGTTTATGGGGTGACAAGAGATTGGCAAGGTGATCCATGCAGCCCGAAAGACTACTTGTGGGAGGGTCTGAATTGTACGTATCCCGTAATTGACTCCCCAAGAATCATAACTTTGAACTTATCTTCAAGTGGATTGTCAGGAAAAATAGACCCTTCAATTTTAAATCTCACCATGTTGGAGAAATTGGATTTATCAAACAATAGCTTAAACGGTGAAGTTCCTGATTTTCTGTCTCAATTACAATACTTGAAGATCTTGAACTTGGAGAATAATAACCTCTCCGGTTCAATTCCCTCAACACTTGTTGAAAAATCTAAGGAAGGTTCCCTATCACTAAGTGTGGGCCAAAATCCATATCTATGTGAATCTGGTCAATGCAATTTCGAGAAGAAACAAAAGAACATTGTTACGCCCATAGTAGCATCAATTTGTGGGGCGTTGATTCTTCTAGTAGCCGTGGCAATATTGTGGACCCTTAAAAGGAGAAAATCAAAAGAAAAATCAACAGCTTTGATGGAAGTGAATGATGAAAGTGAGATCTCACGCCTGCGATCCACAAAAAAAGATGATTCATTAGCGCAAGTCAAAAAACAAATATATTCATACTCTGACGTCCTTAAAATCACCAACAATTTCAATACAATTATTGGTAAAGGAGGATTTGGAACAGTTTACCTGGGCTATATCGATGACAGTCCAGTTGCAGTGAAAGTGCTTTCTCCATCGGCTGTACATGGCTTTCAACAATTTCAAGCAGAGGTTAAACTTCTAATCAGAGTTCATCACAAAAACTTAACATCCCTTATTGGTTATTGCAATGAAGGAACCAATAAGGCTCTCATATATGAGTATATGGCTAATGGGAACTTACAAGAACATCTCTCTGGTAAACACAGCAAATCAACGTTCTTGAGCTGGGAGGACAGACTTCGTATAGCAGTGGATGCAGCCTTAGGATTGGAGTATCTGCAAAATGGTTGCAAGCCTCCAATAATCCACAGAGATGTAAAATCTACAAACATCTTGTTGAATGAACACTTCCAAGCAAAATTGTCTGATTTTGGTCTATCCAAAGCTATCCCAACTGATGGGGAATCTCTCGTGTCAACTGTCCTTGCTGGTACTCCTGGTTATCTGGACCCTCACTGCCACATATCCAGTAGATTAACACAGAAAAGCGATGTTTATAGCTTTGGAGTTGTTCTTTTGGAAATAATCACAAACCAACCAGTAATGGAAAGGAATCAAGAAAAGGGTCACATAAGTAGAAGGGTTAGGTCCTTGATTGAGAAAGGGGATATCAGGGCCATAGTTGACTCAAGGTTAGAAGGAGATTATGACATTAACTCAGCTTGGAAAGCCTTAGAAATAGCAATGGCTTGTGTTTCTAAAAATCCCAACGAAAGGCCAATCATGAGTGAGATTGCTATTGAACTAAAGGAGACATTAGCGATCGAAATAGCTCGAGCAAAACATTGTGATGCCAATCCCAGACATTTAGTTGAAGCGGTTAGCGTGAATGTGGACACCGAATTCATGCCCCTGGCGAGGTAG 2691 0.4017 MRMSRSFLVAFLGCLLLAVPIQAQDQSGFVSIACGAPAGVNFTVLETGLNYTSDANFINTGVKSTIVSELRDQFQRHMWNLRSFPEGKRNCYKINITRGSKYLIRAFFLYGNYDGLNMLPQFDLLLGANRWRTVNIKNASVSQSFEIIYVPSLDYVHICMVDTGLGTPFISAIELRSLRNNIYKTEFGSLETYIRRDLGSNKGYRYDDDVYDRYWSNDDADTWYDNVDKWKQLNFPIDADSLVQKHYQPPAVVMSTAVTPANVSAPLVISWEPYDPKESFYVYMHFTEIQVLAKNQTRQFNITLNGNLLYGNMSPRYHSVRTIYTTSGISGKLINFSFVMTETSTLPPIINAIEIYRVKEFPQQDTYQGDVDAITTIKSVYGVTRDWQGDPCSPKDYLWEGLNCTYPVIDSPRIITLNLSSSGLSGKIDPSILNLTMLEKLDLSNNSLNGEVPDFLSQLQYLKILNLENNNLSGSIPSTLVEKSKEGSLSLSVGQNPYLCESGQCNFEKKQKNIVTPIVASICGALILLVAVAILWTLKRRKSKEKSTALMEVNDESEISRLRSTKKDDSLAQVKKQIYSYSDVLKITNNFNTIIGKGGFGTVYLGYIDDSPVAVKVLSPSAVHGFQQFQAEVKLLIRVHHKNLTSLIGYCNEGTNKALIYEYMANGNLQEHLSGKHSKSTFLSWEDRLRIAVDAALGLEYLQNGCKPPIIHRDVKSTNILLNEHFQAKLSDFGLSKAIPTDGESLVSTVLAGTPGYLDPHCHISSRLTQKSDVYSFGVVLLEIITNQPVMERNQEKGHISRRVRSLIEKGDIRAIVDSRLEGDYDINSAWKALEIAMACVSKNPNERPIMSEIAIELKETLAIEIARAKHCDANPRHLVEAVSVNVDTEFMPLAR* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0194 896 SMART serkin_6 589 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0194 896 SUPERFAMILY L domain-like 382 482 - -
Gso15g0194 896 Pfam Malectin-like domain 32 358 IPR024788 -
Gso15g0194 896 Gene3D Phosphorylase Kinase; domain 1 572 663 - -
Gso15g0194 896 Gene3D - 190 359 - -
Gso15g0194 896 ProSitePatterns Protein kinases ATP-binding region signature. 595 616 IPR017441 GO:0005524
Gso15g0194 896 PANTHER PUTATIVE-RELATED 15 894 - -
Gso15g0194 896 PANTHER OS07G0107800 PROTEIN-RELATED 15 894 - -
Gso15g0194 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Gso15g0194 896 Gene3D Transferase(Phosphotransferase) domain 1 664 878 - -
Gso15g0194 896 Gene3D Ribonuclease Inhibitor 372 491 IPR032675 -
Gso15g0194 896 Pfam Protein tyrosine and serine/threonine kinase 591 856 IPR001245 GO:0004672|GO:0006468
Gso15g0194 896 CDD STKc_IRAK 595 860 - -
Gso15g0194 896 SUPERFAMILY Protein kinase-like (PK-like) 573 856 IPR011009 -
Gso15g0194 896 ProSiteProfiles Protein kinase domain profile. 589 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0194 Gso-Chr15 1664652 1672358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0194 1 896 Receptor kinase-like Gene Family AT1G51800 47.363 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso15g0194 Malectin_like 1.9e-111 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0194 - - gmx:100779102 1683.69