Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0193 ATGGATGGAAAATGGAGATGCCATTGGGCTTGGAGCTGCACCTTGTGGTGTGTCCTTGCATATACCGTTTCAGAATTTACTGGAAAGTCCATAGTTATGGCCACAGGGAAGAACTCTATGCATCACAAACAAGGAAGAAGGAAACTAGATGATGTAACTGGTTCTATTTGCATTGACTGTGGGATAGCAGAAGGCCTTGACTATACTGATGACAAAACTCAGATTCATTACACTTCAGATGCACAGTTCATTGGCACTGGAACAAGCAAAAGCATATCCCACAAGTTCATTTCTGACACACCCCAAAGAACTTTCACAAATGTAAGAAGCTTCCCTGAGGGGAAAAAGAATTGCTACACGCTACGACATCCAGAAGGCAGAAATACTATTTACTTGATAAGAGCTTCGTTCATGTATGGGAACTATGATGACTTAAATAAGCTGCCACAATTTGATCTCTATATTGGGGTTAATTTATGGGACACTGTGATGTTTGACAATGCCACTCATGTGGTAATCAAGGAGATTCTACATGTGCCATCCTTGGATGAATTATATGTTTGTTTATTGAACACTGATAAAGGAACTCCTTTTATATCAGCACTGGAGGTGAGGCACTTTGATCATTCCAGTTACAGAACAAACTCTAAACTCTTATCCCTCTATAAACGTTTTGACATTGGCTCAACAACCAATGAAATAGTGAGGTATGACAAAGATGATTACGATCGAATGTGGTATCCGTATAACTTACCTGATTCTACACCACTCAATACTTCCTTCACCGTCGACTCCTTGAACCATACTGCATATCACTTGCCATCGGCAGTAATGAAAACTGCTGTGAGGCCGACAAATGAAAATGATTCCCTGGAATTTGAATTTGACACTGGACAACCTACTTCAGAGTCTTATGTTTACATGCACTTTGCTGAAATCGAAGTGCTTAATGAAAATGAAAGCAGGGCATTTGACATTACATTGAATGGAAAATTATGGGCTGAATATGTAACTCCCACGTATTTGCAGTCAAATACAATAGATGGTAATCAGTCCATTAGGGGAAGTAAGCTCAAGTTCTCTATGCACAAGAAACCAAATTCCACCCATCCACCCATTCTAAATGCAATGGAGATTTACATTGTTAAAGAATTCTTGCATTCTCCTACAAACCAAGATGATGTTAAGGCTATCATCAACATCAAATCGCATTACAAGTTGGCATCATCGGTGGGTAAATCCTGGCAAGGAGATCCTTGCGCACCATCGAAATACTCTTGGAATGGACTCAACTGCAGCAATAATGGATATAATTCACCCACAATAACTGCATTATATCTGGCCTCCAGTGGATTAGGTGGCACAATAATTGCATCATTTTTGGAGCTCAAATTCTTAGAATCCTTGGATTTATCAAACAATAGCTTAACAGGACCTCTACCTGATTTTTCACAACTGCAACACTTAAAGGCTCTCAATTTATCAGGGAATAGACTCTCAGGTCAAATTCCTTCACTTCTCAAGGAAAGATCAAATAATGGTTCACTTTTGCTGAGTGTGGATGGAAATCTGGATCTCTGCCAGGAGGGCCCATGTGAAGAGGATAAAATGAATATTGCCCCACTTGTTGCAGGCATTCTTTCAGTTGTACTCTTTTTCATTGTATTGGGTATTGTACTGAATATCATTTGGAGAAGGAGATGCAACAGAAAACCAGCATCAAAGCAAGCTGTGAGATTAAATGAAGAGGTTGTGCTGAAGACAAACAATACACAGTTCACATACTCTCAGATATCGACTATTACCAATAACTTCGACAAAATGATTGGGAAGGGAGGATGTGGAATTGTTTATCTTGGTTCCTTACAGGATGGCACACAGGTTGCTGTCAAAATGCTCTTGCCAAAATGTCCTCAGGGATCACAACAGTTTCAGACTGAGGCTCAACTCTTAATGCGTGTGCATCACAAGAACTTAGCTTCCTTTGTCGGATACTGTAATGAAGTTGGACACACAGGCATCATCTACGAATATATGGCTTATGGGAACTTGGAAGAGTATCTATCAGATGCAAGGAGAGAACCATTAAGTTGGAGACAGAGGATTCAGATAGCAGTTGATGCTGCTCAAGGTATCGAGTACTTGCATCATGGCTGCAAGCCGCCAATAATTCATAGAGACATTAAGACTGCAAACATTTTGCTGAATGAGAAAATGCAAGCAAAAGTAGCTGATTTTGGTTTCTCAAAACTTTTCTCAGCTGAAAATGAAAGTCATGTATCGACTGTAGTTATTGGCACATTAGGATATCTTGATCCAGAATACTACACATCCAGCAGGCTAACCGAGAAAAGCGACGTTTATAGTTTTGGCATTGTGCTTTTGGAGCTAATTACTGGGCAGCCAGCAATAATAAAAGGTCATCAGAACACTCACATTGCGCAATGGGTTAACAACTTTCTTGCAAAAGGAGATATACAACAAATTGTTGATCCAAGGTTGCGGGGAGATTTTGACTTTGGCTCTGTGTGGAAGGCCTTGGAGGCAGCAATAGCTTGTGTGCCTTCAATTTCTATCCAAAGGCCATCAATGAGTTACATTGTCGGCGAACTCAAAGAGTCCTTAGAAATGGAAGCAGCTCGTGAAAAAGAAGGCATCAACTCGATTGAAATCAATGTTGTTGATCTTGAAGCTTTGTGTGGCCCAGATGCAAGATAG 2718 0.4029 MDGKWRCHWAWSCTLWCVLAYTVSEFTGKSIVMATGKNSMHHKQGRRKLDDVTGSICIDCGIAEGLDYTDDKTQIHYTSDAQFIGTGTSKSISHKFISDTPQRTFTNVRSFPEGKKNCYTLRHPEGRNTIYLIRASFMYGNYDDLNKLPQFDLYIGVNLWDTVMFDNATHVVIKEILHVPSLDELYVCLLNTDKGTPFISALEVRHFDHSSYRTNSKLLSLYKRFDIGSTTNEIVRYDKDDYDRMWYPYNLPDSTPLNTSFTVDSLNHTAYHLPSAVMKTAVRPTNENDSLEFEFDTGQPTSESYVYMHFAEIEVLNENESRAFDITLNGKLWAEYVTPTYLQSNTIDGNQSIRGSKLKFSMHKKPNSTHPPILNAMEIYIVKEFLHSPTNQDDVKAIINIKSHYKLASSVGKSWQGDPCAPSKYSWNGLNCSNNGYNSPTITALYLASSGLGGTIIASFLELKFLESLDLSNNSLTGPLPDFSQLQHLKALNLSGNRLSGQIPSLLKERSNNGSLLLSVDGNLDLCQEGPCEEDKMNIAPLVAGILSVVLFFIVLGIVLNIIWRRRCNRKPASKQAVRLNEEVVLKTNNTQFTYSQISTITNNFDKMIGKGGCGIVYLGSLQDGTQVAVKMLLPKCPQGSQQFQTEAQLLMRVHHKNLASFVGYCNEVGHTGIIYEYMAYGNLEEYLSDARREPLSWRQRIQIAVDAAQGIEYLHHGCKPPIIHRDIKTANILLNEKMQAKVADFGFSKLFSAENESHVSTVVIGTLGYLDPEYYTSSRLTEKSDVYSFGIVLLELITGQPAIIKGHQNTHIAQWVNNFLAKGDIQQIVDPRLRGDFDFGSVWKALEAAIACVPSISIQRPSMSYIVGELKESLEMEAAREKEGINSIEINVVDLEALCGPDAR* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0193 905 Pfam Malectin-like domain 58 381 IPR024788 -
Gso15g0193 905 PRINTS Leucine-rich repeat signature 466 479 - -
Gso15g0193 905 PRINTS Leucine-rich repeat signature 486 499 - -
Gso15g0193 905 Pfam Protein tyrosine and serine/threonine kinase 605 817 IPR001245 GO:0004672|GO:0006468
Gso15g0193 905 Gene3D Transferase(Phosphotransferase) domain 1 679 897 - -
Gso15g0193 905 Gene3D Ribonuclease Inhibitor 393 518 IPR032675 -
Gso15g0193 905 SUPERFAMILY Protein kinase-like (PK-like) 583 869 IPR011009 -
Gso15g0193 905 SUPERFAMILY L domain-like 392 510 - -
Gso15g0193 905 SMART serkin_6 603 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0193 905 ProSiteProfiles Protein kinase domain profile. 603 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0193 905 PANTHER OS07G0107800 PROTEIN-RELATED 35 884 - -
Gso15g0193 905 Gene3D - 223 382 - -
Gso15g0193 905 Coils Coil 872 892 - -
Gso15g0193 905 ProSiteProfiles Leucine-rich repeat profile. 465 487 IPR001611 GO:0005515
Gso15g0193 905 ProSiteProfiles Leucine-rich repeat profile. 488 510 IPR001611 GO:0005515
Gso15g0193 905 ProSitePatterns Serine/Threonine protein kinases active-site signature. 723 735 IPR008271 GO:0004672|GO:0006468
Gso15g0193 905 PANTHER KINASE-TRANSFORMING PROTEIN RAF, PUTATIVE-RELATED 35 884 - -
Gso15g0193 905 CDD STKc_IRAK 609 873 - -
Gso15g0193 905 Pfam Leucine rich repeat 441 499 IPR001611 GO:0005515
Gso15g0193 905 Gene3D Phosphorylase Kinase; domain 1 585 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0193 Gso-Chr15 1655345 1660386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0193 48 905 Receptor kinase-like Gene Family AT2G19210 46.667 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gso15g0193 Malectin_like 3.3e-110 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0193 - - gmx:100791717 1814.28