Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0187 ATGGGCAAAGCTACAAGGTGGTTGAAGGGTTTGTTGGGAAAGAAGAAAGAGAAGGACTACCGTGGCTTTTCGGGCTCATTGGATCTTGACAAGAGGGAAAAAAAACGATCGGAGAAGGATGAAGTGAGTCACATTACTCCAACCAATGTTACCACCTTTGATCGAACTAGGTTCAGATCCTATGCTGCCCCAAAAGAGAAGAACAAGCACTCCATTGATGTGGCTGTTGTGAGATCAAAAAGCTGTGACAGAGGCACCTTACTTATTGGAAGCAGGGAGGGCTGGGCTGCTGTGTTGATTCAATCCTTTTTCAGAGGTTATTTGGCGCGAAAGGCTCTTAGAGCACTCAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTATCTGGTTCGAAAAAGGGTTGCTGCAACTCTTCACAGTGTTCAAGCTATGTTAAGAGCTCAAGCTGTTGCTCGATCTGTGCGAGCTCGTCGTTCCATGGACAAGGAGAATAGATTTCATCCACAAACTCCTTCCAGAAAATATATGCAACGGTTTGATGAAGCAAGAAATTATCAATTACACAATAGAAGAGTACCTATATACTGTAAGGCACCCTTTAATGGATTTGATGAGAGTCAAAAAGTTGTTGAGGTTGACACTCACATGCCACATTCAAGTAGTAGGAGCATTAACACTGCAATGTCAGAATGTGGAGAAGACTTGCACTATCAAGCAATGTCATCCTCTCTTGGTTGTCCAATTCAAGGTCGAATCTCACTTCATGAGAGGCAACACCCTCAAGAGTTTGAATGGCTTTTCAATGTTGATGAAGGTAATAACAAGTTCTCCACAGCACACAACACGCCTCGTTTACCAAAATGCATGCCACCAGGTACTCCAGTGAAGAGTATTTGTGGAAAAACCTTCTTTAGGCCTTGCTCCAATTTCCCTAACTACATGGCCAACACTCACTCTTCTAAGGCCAAACTAAGGTCTCACAGTGCTCCAAAGCAAAGGCCTGAACTCAAGAAAAGGCTTTCAATCAATGAAATGATAGCAGCAAGAAATAGTTTTAGTGGTGTTAGAATGCAGTGGTCGTCATCCAACCCGAAAACTCAAGAAGATTGCTGCTTTTTTGAAAGGGTTATTTAG 1137 0.4283 MGKATRWLKGLLGKKKEKDYRGFSGSLDLDKREKKRSEKDEVSHITPTNVTTFDRTRFRSYAAPKEKNKHSIDVAVVRSKSCDRGTLLIGSREGWAAVLIQSFFRGYLARKALRALKGLVKIQALVRGYLVRKRVAATLHSVQAMLRAQAVARSVRARRSMDKENRFHPQTPSRKYMQRFDEARNYQLHNRRVPIYCKAPFNGFDESQKVVEVDTHMPHSSSRSINTAMSECGEDLHYQAMSSSLGCPIQGRISLHERQHPQEFEWLFNVDEGNNKFSTAHNTPRLPKCMPPGTPVKSICGKTFFRPCSNFPNYMANTHSSKAKLRSHSAPKQRPELKKRLSINEMIAARNSFSGVRMQWSSSNPKTQEDCCFFERVI* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0187 378 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 378 - -
Gso15g0187 378 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 136 IPR027417 -
Gso15g0187 378 Pfam Protein of unknown function (DUF4005) 278 356 IPR025064 -
Gso15g0187 378 SMART iq_5 115 136 IPR000048 GO:0005515
Gso15g0187 378 SMART iq_5 92 114 IPR000048 GO:0005515
Gso15g0187 378 ProSiteProfiles IQ motif profile. 96 121 IPR000048 GO:0005515
Gso15g0187 378 Pfam IQ calmodulin-binding motif 120 134 IPR000048 GO:0005515
Gso15g0187 378 Pfam IQ calmodulin-binding motif 95 114 IPR000048 GO:0005515
Gso15g0187 378 Gene3D - 120 167 - -
Gso15g0187 378 Gene3D - 52 119 - -
Gso15g0187 378 ProSiteProfiles IQ motif profile. 117 144 IPR000048 GO:0005515
Gso15g0187 378 PANTHER IQ-DOMAIN 5-RELATED 1 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0187 Gso-Chr15 1611563 1613664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0187 1 358 IQD Protein Family AT3G16490 41.439 2.89e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0187 - - gmx:100806729 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0187 15 1611563 1613664 Gso11g3626 11 51918012 51921036 GST
Gso15g0187 15 1611563 1613664 Gso7g0127 7 1177829 1180855 PCT
Gso15g0187 15 1611563 1613664 Gso8g1663 8 16281073 16283445 PCT
Gso7g0127 7 1177829 1180855 Gso15g0187 15 1611563 1613664 PCT
Gso8g1663 8 16281073 16283445 Gso15g0187 15 1611563 1613664 PCT