Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0186 ATGGATGAAAGGTCAAGAAACGAGGCATCTCCTCAGCTGTTAGATTTGATCTCAAACGAGAGAGAGTGGCAGATGAACAAGAGAAACGAAGGAAAATCCTCAGAAGAAAGAAAGCTTGAACTGAGGCTTGGTCCACCTGGTGAAGACTGGTCTCTGGGCGGTAAAATGAAGAACACAGAAAGAGAAGAATCTCTTCTCTCTCTTGGTTGCTTCTCTCCTAACAATGGGTTCCAGAGCAAGGCTTCTCCATGGCCAAACTACCACCACCACCACCAGGGTAACAACAACAAAGCCTCTTCTTCATCATTTCTTCAGTGCCCTAAGGTTGTGGTAGAGTTGCAGAATGGTGGTGATGGCAAAGTATTCTCTCCCTCTTCTGCAAATACAGCTGTGTCCCAGCCCAACACCTCTCAGAAAAGAACTGCTCCTGCTCCAGTGGTGGGGTGGCCCCCAATTCGTTCCTTCAGGAAGAACCTTGCAAGCAGCAGCAGTGCTTCTAAGCCACCTCCTGAGTCTCAGGCTGAGCAGCACAACAAGGTTGCTGGTAAAAAACCTGTTGACAACTATGCTAATAATAAAGGTTTGTTTGTCAAGATCAACATGGATGGTGTTCCTATAGGGAGAAAAGTGGACCTCAATGCCTATGACAGCTATGAAAATCTCTCTTCCGCCGTGGACGAGCTATTCAGAGGTCTTCTTGCTGCTCAAAGAGATTCCTCTGCTGGTGGAGTTCACAACAAGCAGGAGGAAGAGAAAGCAATTACGGGGTTATTGGATGGAAGTGGAGAGTATACTCTTGTTTATGAGGATAATGAAGGAGACAGGATGCTTGTTGGGGATGTGCCATGGCACATGTTTGTATCAACAGTGAAGAGGCTACGAGTGTTGAAGAGTTCTGAGCTTTCTGCTTTTACCCTTGGGAGTAAGCAAGACAAGATACCCCTTGACTCAGCAATGAAATGA 963 0.4652 MDERSRNEASPQLLDLISNEREWQMNKRNEGKSSEERKLELRLGPPGEDWSLGGKMKNTEREESLLSLGCFSPNNGFQSKASPWPNYHHHHQGNNNKASSSSFLQCPKVVVELQNGGDGKVFSPSSANTAVSQPNTSQKRTAPAPVVGWPPIRSFRKNLASSSSASKPPPESQAEQHNKVAGKKPVDNYANNKGLFVKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSSAGGVHNKQEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGSKQDKIPLDSAMK* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0186 320 MobiDBLite consensus disorder prediction 156 173 - -
Gso15g0186 320 MobiDBLite consensus disorder prediction 120 142 - -
Gso15g0186 320 MobiDBLite consensus disorder prediction 21 44 - -
Gso15g0186 320 Pfam AUX/IAA family 39 303 IPR033389 -
Gso15g0186 320 Gene3D - 188 309 - -
Gso15g0186 320 MobiDBLite consensus disorder prediction 81 101 - -
Gso15g0186 320 MobiDBLite consensus disorder prediction 1 58 - -
Gso15g0186 320 SUPERFAMILY CAD & PB1 domains 190 295 - -
Gso15g0186 320 PANTHER AUXIN-RESPONSIVE PROTEIN IAA26 6 311 - -
Gso15g0186 320 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 6 311 IPR003311 GO:0005634|GO:0006355
Gso15g0186 320 MobiDBLite consensus disorder prediction 120 186 - -
Gso15g0186 320 ProSiteProfiles PB1 domain profile. 194 298 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0186 Gso-Chr15 1588841 1592613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0186 197 309 B3 DNA Binding Superfamily AT4G23980 33.628 6.17e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gso15g0186 AUX_IAA 2.9e-72 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0186 15 1588841 1592613 Gso11g3628 11 51942326 51946436 GST
Gso15g0186 15 1588841 1592613 Gso7g0129 7 1207565 1211087 PCT
Gso15g0186 15 1588841 1592613 Gso8g1666 8 16308908 16312104 PCT
Gso7g0129 7 1207565 1211087 Gso15g0186 15 1588841 1592613 PCT
Gso8g1666 8 16308908 16312104 Gso15g0186 15 1588841 1592613 PCT