Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0182 ATGAATCTTATACAAAATCTCCCTTTAAGGTTGCTACCACACTTGTACATCTTTCTGCTTCATCTTTATTGTACAAGTTCTTATCCCACACCCATGAACTGCACCGACACAACTCGTGTTTGCACTTCTTTCTTGGCTTTTAAGCCTCAACCAAACCAAACCTTGGCTGTGATACAAAGCATGTTTGACGTGTTGCCCGGTGAGATCACCGTTGAAGGCAATGGCTGGGATTACATATTCATCAGGAAAAACTGTTCTTGTGCTGCTGGTATGAAGAAGTATGTGTCTAACACCACTCTCACTGTGAAATCCAATGGAGGTTTTGAGCATGATTTGGTGATGGATGCCTATGATGGGCTTGCTCTCTTGCCAAACACGACGACGCGTTGGGCAAGAGAAGGCGGTGTCATATCTCTGAGCTTGTTCTGTAGTTGTTCCAGTGGACTATGGAACTATCTAATGAGCTATGTCATCAGAGATGGGGACAGTGTTGAATCACTAGCAAGCCGGTTTGGGGTTAGTATGGATAACATTGAGACAGTGAATGCCATTGACAATCCTGATAGCCTCACTGTTGGTTCTCTCTATTATATACCTTTGAATTCGGTTCCCGGTGAGCTTTACCACTTGAAGAATGATACTCCATCAGCTCCAATCCCTTCGCCATCTGTTGATAATTTTTCAGCTGACCATGTGACCCAGAAGGCTCATGTACCCCATGAGTGGATCGTAGGAGGTTTAGGGATTGGTCTTGCTCTGATAATATTAACCATTATTGTGTGGGTGGCCCTGAGATCACCCAATTGTTTGGTTGAAGCCAGAAATAATGCAAAAGATTCTGCTGGGAAGATCTCTAAGAAGTTCTATGTTTTTGGGAATCCAAGTTTGTTTTGTGGATGTGGCAAACCTGTGGACCAACATCAAACTTATGGTGAATCCAGTAGTCACCAAATTACCGTTACCAAAGCATCAACTCTAATGCCTGACATGTTGGACATGGATAAGCCTGTAGTTTTTTCATATGAAGAAACTTTTTCTTCAACTGATGGTTTCTCTGATTCAAATCTACTTGGGCGCAGAACATATGGCTCTGTTTACCATGGGCTCCTCCGTGACCAGGAAGTTGCTATTAAAAGACTGACAACTACTAAAACTAAAGAATTTATGTCAGAGATAAAAGTTCTGTGCAAGGTTCATCATGCTAATCTGGTAGAATTGATCGGCTATGCGGTTAGTCATGATGAGTTTTTCCTAATTTATGAATTTGCTCAGAGAGGTTCACTCAGCAGCCATTTGCATGATCCTCAAAGTAAGGGTTATTCACCTCTTTCTTGGATCACAAGGGTCCAGATTGCACTTGATGCTGCTAGGGGCCTTGAATACATACATGAGCATACAAAAACTCGTTACGTCCATCAAGATATCAAGACAAGCAACATTTTCCTTGATGCTTCCTTTAGAGCCAAGATATCAGATTTTGGGTTAGCAAAACTTGTAGGTGAAACAAATGAGGGAGAAATCGCAGCAACCAAAGTTGTAAATGCATATGGATATCTTGCTCCAGAATACTTGAGCAATGGTCTTGCAACGACCAAAAGTGATGTCTATGCATTTGGTGTTGTTCTTTTTGAGATTATATCGGGGAAGGAGGCCATAATTCAAACACAAGGCCCTGAAAAACGATCATTGGCATCTATTATGTTGGCAGTTCTTAGGAACTCACCTGATACCGTGAGCATGTCAAGCACGAGAAACCTCGTTGATCCTATTATGATGGATCTATATCCCCATGATTGTGTGTATAAGATGGCCATGCTGGCAAAGCAATGTGTGGATGAGGATCCTGTATTACGCCCTGATATGAAACAAGTTGTGATTTTCCTATCACAAATCCTGTTGTCTTCTGTTGAGTGGGAAGCGACTCTTGCTGGGAACAGCCAGGTATTCAGTGGCCTTGTTCAGGGAAGATAG 1971 0.4226 MNLIQNLPLRLLPHLYIFLLHLYCTSSYPTPMNCTDTTRVCTSFLAFKPQPNQTLAVIQSMFDVLPGEITVEGNGWDYIFIRKNCSCAAGMKKYVSNTTLTVKSNGGFEHDLVMDAYDGLALLPNTTTRWAREGGVISLSLFCSCSSGLWNYLMSYVIRDGDSVESLASRFGVSMDNIETVNAIDNPDSLTVGSLYYIPLNSVPGELYHLKNDTPSAPIPSPSVDNFSADHVTQKAHVPHEWIVGGLGIGLALIILTIIVWVALRSPNCLVEARNNAKDSAGKISKKFYVFGNPSLFCGCGKPVDQHQTYGESSSHQITVTKASTLMPDMLDMDKPVVFSYEETFSSTDGFSDSNLLGRRTYGSVYHGLLRDQEVAIKRLTTTKTKEFMSEIKVLCKVHHANLVELIGYAVSHDEFFLIYEFAQRGSLSSHLHDPQSKGYSPLSWITRVQIALDAARGLEYIHEHTKTRYVHQDIKTSNIFLDASFRAKISDFGLAKLVGETNEGEIAATKVVNAYGYLAPEYLSNGLATTKSDVYAFGVVLFEIISGKEAIIQTQGPEKRSLASIMLAVLRNSPDTVSMSSTRNLVDPIMMDLYPHDCVYKMAMLAKQCVDEDPVLRPDMKQVVIFLSQILLSSVEWEATLAGNSQVFSGLVQGR* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0182 656 PANTHER BNAA06G02020D PROTEIN 32 656 - -
Gso15g0182 656 Pfam LysM domain 156 193 IPR018392 -
Gso15g0182 656 Pfam Protein tyrosine and serine/threonine kinase 356 626 IPR001245 GO:0004672|GO:0006468
Gso15g0182 656 Gene3D Transferase(Phosphotransferase) domain 1 424 643 - -
Gso15g0182 656 SUPERFAMILY LysM domain 154 199 IPR036779 -
Gso15g0182 656 SMART serkin_6 351 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0182 656 CDD LysM 155 198 IPR018392 -
Gso15g0182 656 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 32 656 IPR044812 GO:0019199|GO:0045087
Gso15g0182 656 Gene3D Phosphorylase Kinase; domain 1 323 422 - -
Gso15g0182 656 Gene3D LysM domain 151 206 IPR036779 -
Gso15g0182 656 ProSiteProfiles Protein kinase domain profile. 351 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0182 656 SMART LysM_2 155 199 IPR018392 -
Gso15g0182 656 ProSiteProfiles LysM domain profile. 154 198 IPR018392 -
Gso15g0182 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Gso15g0182 656 SUPERFAMILY Protein kinase-like (PK-like) 327 628 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0182 Gso-Chr15 1556297 1562304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0182 31 656 Receptor kinase-like Gene Family AT1G51940 62.422 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gso15g0182 PK_Tyr_Ser-Thr 5.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0182 - - gmx:100789067 1280.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0182 15 1556297 1562304 Gso11g3630 11 51981228 51986574 GST
Gso15g0182 15 1556297 1562304 Gso7g0130 7 1220285 1227109 PCT
Gso15g0182 15 1556297 1562304 Gso8g1667 8 16323027 16330143 PCT
Gso7g0130 7 1220285 1227109 Gso15g0182 15 1556297 1562304 PCT
Gso8g1667 8 16323027 16330143 Gso15g0182 15 1556297 1562304 PCT