Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso15g0178 | ATGACTCGGCGCTGCTCCCACTGCACCAACAACGGCCACAACTCCCGGACATGCCCGTCGCGGGGAGGGGGCGGCGTCAAGCTGTTCGGGGTGAGGCTGACGGATGGATCAATCATAAAGAAGAGCGCTAGCATGGGGAACCTTAACCTCTCCTCCTCCTCCTCCGCCGCCGCCGCACATCTGCAATTCCGTTCATCTCCTTCTTCTTCCAACCTCCCCGCGGCCTCATCGCCCAATCCAAGCTCCCCGTGCTCCGACCCGCCCCAAGGCTACTTGTCCGATGACCCCGCCCACGTCTCCACCTTCGCTAACCGCCGCGGTGATAGAAAAAAAGGTGTGCCATGGACTGAAGAAGAACATCGGCTGTTCTTAATTGGTCTCCAGAAGCTGGGCAAAGGAGACTGGCGTGGGATAGCACGTAATTTTGTTGTATCAAGAACCCCTACTCAAGTAGCAAGTCATGCCCAAAAGTATTTTATCCGGCAGAGTCATGCTACCAGGAGAAAGAGACGTTCCAGCCTTTTTGACATGGTTCCAGATATGTCTTCAGATCAACCTTCTGTGCCAGAAGAACAAGTGCTGCTTCCACCTCCCGAGAACTCACAACCTTGCAATGAAAAATCACAGCCCTCATTAAATCTCTCCCTCAAATCAGAATTTGAACCTATGGAGACTACTTCTCAAGAAAATGTGCAACAGACCAATGAACCTATGATGGGATCAAACAGATTGACACCAATGGCTCCTCATGGATGCTTTCCCGCATATTTACCTGTTCCTTTTCCCATGTGGCCATCAACTTGGGTTCACCCCTTTGAAGAAGTTAAGGGAGGAGAGACATGCCACCATCAGATCCACAAGCCAATCCCAGTCATTCCAAAGGAACCTGTTAATGTTGACGAACTTGTGGGAATGTCTCATCTAAGCATTGGGGAAGCACAGGTACGTGATAGAGAGCCTTCCCCTCTTTCCATAAAGTTGTTAGGAGAGCCCTCAAGGCAGTCAGCATTCCATGCAAATGTCCCGGTTGGTAGTTCGGATTTAAACAATGGCAAGGACAACGCAATTCAAGCTGTCTGA | 1080 | 0.5083 | MTRRCSHCTNNGHNSRTCPSRGGGGVKLFGVRLTDGSIIKKSASMGNLNLSSSSSAAAAHLQFRSSPSSSNLPAASSPNPSSPCSDPPQGYLSDDPAHVSTFANRRGDRKKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKYFIRQSHATRRKRRSSLFDMVPDMSSDQPSVPEEQVLLPPPENSQPCNEKSQPSLNLSLKSEFEPMETTSQENVQQTNEPMMGSNRLTPMAPHGCFPAYLPVPFPMWPSTWVHPFEEVKGGETCHHQIHKPIPVIPKEPVNVDELVGMSHLSIGEAQVRDREPSPLSIKLLGEPSRQSAFHANVPVGSSDLNNGKDNAIQAV* | 360 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso15g0178 | 359 | Gene3D | - | 113 | 164 | - | - | |
Gso15g0178 | 359 | SUPERFAMILY | Homeodomain-like | 109 | 163 | IPR009057 | - | |
Gso15g0178 | 359 | Pfam | Myb-like DNA-binding domain | 114 | 159 | IPR001005 | - | |
Gso15g0178 | 359 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Gso15g0178 | 359 | MobiDBLite | consensus disorder prediction | 61 | 97 | - | - | |
Gso15g0178 | 359 | MobiDBLite | consensus disorder prediction | 177 | 211 | - | - | |
Gso15g0178 | 359 | SMART | sant | 111 | 161 | IPR001005 | - | |
Gso15g0178 | 359 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Gso15g0178 | 359 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 110 | 162 | IPR006447 | GO:0003677 | |
Gso15g0178 | 359 | MobiDBLite | consensus disorder prediction | 340 | 359 | - | - | |
Gso15g0178 | 359 | CDD | SANT | 114 | 159 | IPR001005 | - | |
Gso15g0178 | 359 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 1 | 353 | - | - | |
Gso15g0178 | 359 | MobiDBLite | consensus disorder prediction | 61 | 79 | - | - | |
Gso15g0178 | 359 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 107 | 163 | IPR017930 | - | |
Gso15g0178 | 359 | ProSiteProfiles | SANT domain profile. | 115 | 163 | IPR017884 | - | |
Gso15g0178 | 359 | ProSiteProfiles | Myb-like domain profile. | 107 | 159 | IPR001005 | - | |
Gso15g0178 | 359 | PANTHER | OS01G0187900 PROTEIN | 1 | 353 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso15g0178 | Gso-Chr15 | 1516426 | 1519605 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Gso15g0178 | Myb_DNA-binding | 8.3e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso15g0178 | - | - | gmx:778032 | 681.404 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso15g0178 | 15 | 1516426 | 1519605 | Gso11g3633 | 11 | 52019095 | 52022577 | GST |