Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0171 ATGGCATCCCGTTTGTTCGTCCTTTGTACTTGTGTGATCATTTTCATGGCTGCCACCAATACTTGTGTTGTTGAAGCTTCCGTGCTATTCAAAGTTGGTGGTGGCTTCGGTTGGCATGAACCTGCAGGCAACAACAATACTGATCAATTTTATATCCAATGGGCTGAAAGGAACAGATTTCAAGTTGGTGATGCTCTTGTTTTTGAGTACCAGAATGACTCAGTTCTAAGTGTGGAGAAATTGGATTACATGAATTGTGACGCAAGTAACCCCATCACTGCCTTTGACAATGGGAATAGCACTTTTAATCTTGATAGGCCAGGGAACTTCTACTTCATCAGTGGAACCGATGATCACTGCAAGAATGGCCAAAAAATACTTGTGGATGTGATGCATCCACATTCTATCCTTAAATCTCCACCACCCATTTCCCTTTCACCTTCCCTTCCACCTGAAGGGTTTCCACCAATGGCTCCTCCACCTTCTGATGATCAAACCTTAGAGGCTTCATCAGCCTCAGTGCTGCTTACTACTATTTTTATGTCTCTTTTCGTCACATTTGTTAGTGTCATGCTGTTGGCATTTTGA 588 0.4286 MASRLFVLCTCVIIFMAATNTCVVEASVLFKVGGGFGWHEPAGNNNTDQFYIQWAERNRFQVGDALVFEYQNDSVLSVEKLDYMNCDASNPITAFDNGNSTFNLDRPGNFYFISGTDDHCKNGQKILVDVMHPHSILKSPPPISLSPSLPPEGFPPMAPPPSDDQTLEASSASVLLTTIFMSLFVTFVSVMLLAF* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0171 195 PANTHER EARLY NODULIN-LIKE PROTEIN 2 11 188 - -
Gso15g0171 195 SUPERFAMILY Cupredoxins 28 131 IPR008972 -
Gso15g0171 195 Pfam Plastocyanin-like domain 46 124 IPR003245 GO:0009055
Gso15g0171 195 PANTHER BLUE COPPER PROTEIN 11 188 IPR039391 GO:0009055
Gso15g0171 195 CDD OsENODL1_like 29 131 IPR041846 -
Gso15g0171 195 Gene3D - 27 136 IPR008972 -
Gso15g0171 195 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0171 Gso-Chr15 1440818 1441920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0171 5 151 Phytocyanin Superfamily AT1G79800 46.939 7.33e-42 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0171 - - gmx:102664880 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0171 15 1440818 1441920 Gso11g3640 11 52100525 52101718 GST