Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0160 ATGTCTAGAGCATTGGAACATGATTACATAGGGTTGGCAGAGAATCCGTCAATGGACGGAAGCTCTGACAAACTGTCTTCTGAGGATGGTAAAACCTCATCACTGAACTTGAAGGAGACAGAGCTGAGGCTTGGCCTCCCTGGTTGCGAGTCTCCAGAGAGAAAATCAGGTTCTGCACTCTGTCTTTTTGGCAAAGAGTTGCAGAACAATAACAATGTTTGCTCAGTTGTAAGCCCTTTGAAGGCTGGGGCCAAGAGGGGCTTCTCTGATGTCACTGAGGGATCTCAAGGAGCTGCTTTGTTCTCTCCAAGAGGGGCCAATGTTGGGAAACCTATTATTGGTTTAGACACTCAAACTAACACCCAACAACAGGCTAACACCACCATCAAAGAGGTTGGTGCAGTTCTTCCTCAATCTACTAAACCGGTTCAGGAAAAGAATGATCAGGTTGCTGCAACAAATGGCCATGCAAGTGCTCCTGCTGCTAAGGCACAAGTTGTGGGATGGCCACCAATTCGATCTTTCCGAAAGAACACTATGGCCTCTAATTTGACAAAGAACAATGATGACGATGAGGGAAAATCAGGATTTGGTTGTCTCTATGTAAAAGTCAGTATGGATGGTGCCCCTTATCTTAGAAAGGTTGATCTCAAAACATATAACAACTATATGGAACTTTCCTCAGCCCTTGAGAAGATGTTCAGCTGCTTTACCATTGGTCAATGCAATTCTCCTGGACTTCCTGGGAAAGATGGACTAAGTGAGAGCTCTTTGAGGGATCTTCTCCATGGATCTGAATATGTTCTTACATATGAAGACAAAGATGGAGATTGGATGCTTGTGGGTGATGTTCCTTGGGAGATGTTCACTGATTCATGTCGGAGACTAAGGATCATGAAAGGCTCTGAGGCAATTGGGCTAGCTCCAAGGGCCATGGAAAAATCTAGGAGCCAAAACTAA 960 0.449 MSRALEHDYIGLAENPSMDGSSDKLSSEDGKTSSLNLKETELRLGLPGCESPERKSGSALCLFGKELQNNNNVCSVVSPLKAGAKRGFSDVTEGSQGAALFSPRGANVGKPIIGLDTQTNTQQQANTTIKEVGAVLPQSTKPVQEKNDQVAATNGHASAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDDDEGKSGFGCLYVKVSMDGAPYLRKVDLKTYNNYMELSSALEKMFSCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSEAIGLAPRAMEKSRSQN* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0160 319 MobiDBLite consensus disorder prediction 1 35 - -
Gso15g0160 319 PANTHER AUXIN-RESPONSIVE PROTEIN 4 311 - -
Gso15g0160 319 Gene3D - 194 313 - -
Gso15g0160 319 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 311 IPR003311 GO:0005634|GO:0006355
Gso15g0160 319 ProSiteProfiles PB1 domain profile. 199 301 IPR000270 GO:0005515
Gso15g0160 319 SUPERFAMILY CAD & PB1 domains 199 300 - -
Gso15g0160 319 MobiDBLite consensus disorder prediction 19 35 - -
Gso15g0160 319 Pfam AUX/IAA family 39 310 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0160 Gso-Chr15 1372184 1375078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0160 201 313 B3 DNA Binding Superfamily AT1G19850 32.174 3.92e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gso15g0160 AUX_IAA 3.4e-92 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0160 K14484 - gmx:100804423 637.876