Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0158 ATGATGGTTGATAACCCTAACTGGTGGAGCATGCATCAACAACCTTCTTTGATCCCTCCCCAATATGTGTTTCCTCCTTCTTCAATTCCTTTTAATTCTTTGACTGAAAATCAAGAGCCTCCTCAGTCATGGAGTCAACTGTTTTTTACTGGATTACCGGGAGAAGAAGAGAAACTTGGGCCTAAGAAGTTGGAAAACTGGAATGTCCAAGATCTTAATACTGCTTCTAGAGTTCCATTTCTTGATGTAATAAGGCAACAAGTTTCTCAAAGGGGCAATTTGTACGACCACGGGCCATCTTGGTCACATATGGTGCCTGTTTCTTCCCCCGTGTCTTGTGTCACTAGCTTCAGTAGTAATAATATATTGGATTTCACTTATAACAAGTCAGATCATAGGAGAAATCTACAACAAGACCAAATATCCAAGTGTAATAGCACAGCCACTGTTGGAGTTTGTAAAAAGGCTAGGGTTCAGCCATCTTCAAGCCAAGCACCTCTCAAGGTGCGGAAGGAGAAGCTAGGTGATAGAATAACAACCCTTCACCAACTAGTTTCCCCGTTTGGAAAGACTGACACAGCTTCTGTCCTGTTAGAAGCCATAGGATATATAAGGTTCCTACAGGGCCAAATTGAGGCACTCAGCTCTCCTTACTTGGGCAGTGCATCAAAAAACATGAGGAATCAACAGTCTGTACATGGAGAAAGAAATTCTGTTCCAGAGGACCCCGGTCAGCTGTTGAATGACAATAATATTGGCCTGAAAAGAAAGGGAGCTCCGAACCAGGATGCGGAAGATCATAAAGCTAAGGATTTGAAGAGTAGAGGGTTGTGCTTGGTCCCGGTGTCTTGTACCCAGAATATGCATGTTGGAAGCTATTACTGGGCGCCCGCATACGGCAGAGGATTTTAA 912 0.4353 MMVDNPNWWSMHQQPSLIPPQYVFPPSSIPFNSLTENQEPPQSWSQLFFTGLPGEEEKLGPKKLENWNVQDLNTASRVPFLDVIRQQVSQRGNLYDHGPSWSHMVPVSSPVSCVTSFSSNNILDFTYNKSDHRRNLQQDQISKCNSTATVGVCKKARVQPSSSQAPLKVRKEKLGDRITTLHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGSASKNMRNQQSVHGERNSVPEDPGQLLNDNNIGLKRKGAPNQDAEDHKAKDLKSRGLCLVPVSCTQNMHVGSYYWAPAYGRGF* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0158 303 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 8 291 - -
Gso15g0158 303 MobiDBLite consensus disorder prediction 222 268 - -
Gso15g0158 303 MobiDBLite consensus disorder prediction 222 236 - -
Gso15g0158 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 158 207 IPR011598 GO:0046983
Gso15g0158 303 CDD bHLH_AtbHLH_like 168 215 IPR045239 -
Gso15g0158 303 Gene3D - 168 233 IPR036638 GO:0046983
Gso15g0158 303 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 291 - -
Gso15g0158 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 219 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0158 Gso-Chr15 1343857 1347408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0158 34 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.359 1.03e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0158 - - gmx:100783401 589.726