Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0152 ATGGCCGCCGACATGTCCAACAATAATAATCCTCCTCCCACTTCTCACGCCAAAGACTTCTTTGCTTCTCCTGCTCTCTCTCTCAGCCTTGCTGGTATTTTTCGCCATGCCGGGGTTGCCGCGGCGGATGAGGCTGCCACTTCGGTGGAGGAGGGTGAAGAGTGTGAGAGGTTAGATGATATTAGCAGCGAGAACTCCGGTCCCACAAGATCCAGATCAGAGGATGATTTCGAAGTTGAAGCTGAACATGAAGATGACGATGCTGATGGAGACAAGAACAAGAAGAAGAAGAGGAAGAAATATCACAGGCACACTGCTGACCAGATCAAAGAAATGGAAGCGCTTTTCAAAGAGTCACCACATCCTGATGAAAAGCAGAGGCAACAACTAAGCAAGCAATTAGGCCTTGCCCCAAGGCAAGTCAAGTTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCAATACAAGAGCGTCATGAAAATTCTTTGTTGAAGTCAGAAATAGAGAAACTAAAGGAGAAAAACAAGACCTTACGAGAGACCATAAACAAAGCTTGTTGCCCCAACTGTGGCGTGCCTACCACAAGCAGAGATGGTGCCATGCCAACTGAAGAACAACAACTACGTATTGAAAATGCCAAACTCAAAGCTGAGGTAGAGAAGCTCCGAGCAGTTTTAGGGAAATACGCACCAGGGTCAACGTCCCCTTCATGTTCTTCTGGCCATGACCAAGAGAATAGAAGCTCTTTGGATTTTTACACTGGAATTTTTGGACTTGATAAGTCAAGGATAATGGATACAGTAAACCAAGCTATGGAGGAGCTCATCAAGATGGCTACCGTGGGGGAACCATTATGGCTTCGTAGCTTCGAGACTGGTCGCGAAATTCTTAACTATGATGAATATGTTAGGGAGTTTGCAGTTGAAAATTCAAGCAGTGGAAAGCCAAGGAGATCCATTGAAGCCTCAAGAGACACTGCAGTTGTTTTTGTGGATCTCCCTCGGCTTGTCCAAAGTTTTCTAGATGTGAATCAGTGGAAGGAAATGTTTCCGTGTTTAATATCTAAGGCGGCCACTGTTGATGTAATATGCAATGGAGAGGGTCCTGGCAGGAATGGTGCAGTGCAACTGATGTTTGCTGAGCTGCAAATGCTCACTCCTATGGTGCCCACAAGAGAAGTATATTTTGTCCGTTTCTGCAAGCAGTTGAGTGCTGAACAGTGGGCAATCGTTGATGTATCCATAGACAAAGTAGAAGACAACATTGACGCGTCCCTCGTGAAATGCAGAAAACGCCCTTCCGGTTGCATTATTGAGGACAAGTCCAATGGCCATTGCAAAGTAATATGGGTGGAGCACTTGGAATGCCAGAAGAGTGCAGTCCATTCAATGTATCGCACCATTGTGAACAGTGGCCTAGCTTTTGGGGCCAGGCATTGGATTGCGACTCTACAACTTCAATGTGAACGTCTAGTTTTCTTCATGGCAACAAATGTTCCCATGAAGGATTCAACCGGTGTTGCCACGTTGGCCGGGAGAAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGAGTTTCTGCCATGCAATTGGCGCGTCAAGCTTCCACACATGGACTAAGTTTACAAGTAAAACTGGAGAAGACATAAGGATAAGTTCTAGAAAGAACTTGAACGATCCTGGTGAACCTCTTGGGTTGATATTGTGCGCTGTTTGTTCTGTATGGTTGCCTGTCTCACCTAATGTTCTGTTTGATTTCCTGAGGGATGAAACGCGACGAACTGAATGGGACATCATGTCAAGTGGTGGGACAGTGCAGTCCATTGCAAATTTAGCCAAAGGACAAGACCGAGGAAATGCCGTAGCCATTCAAACAATTAAATCGAAAGAAAACAGTGTGTGGATACTGCAAGATAGCTACACAAACCCTTATGAGTCAATGGTGGTATATGCTTCTGTGGACATTACTGGCACTCAGTCTGTGATGACAGGATGTGATTCGAGCAATCTTGCCATACTGCCCTCAGGATTCTCTATTATTCCTGATGGTCTTGAGTCAAGGCCATTGGTGATTAGTTCAAGGCAGGAAGAAAAAAATACCGAGGGAGGATCTTTGTTTACAATGGCATTCCAGATTCTTACCAATGCTTCTCCCGCTGCCAAGTTAACAATGGAGTCTGTGGACTCGGTCAACACTCTTGTATCTTGTACATTGAGAAATATCCGAACGAGTCTACAATGTGAAGATGGCTAG 2256 0.4517 MAADMSNNNNPPPTSHAKDFFASPALSLSLAGIFRHAGVAAADEAATSVEEGEECERLDDISSENSGPTRSRSEDDFEVEAEHEDDDADGDKNKKKKRKKYHRHTADQIKEMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKSEIEKLKEKNKTLRETINKACCPNCGVPTTSRDGAMPTEEQQLRIENAKLKAEVEKLRAVLGKYAPGSTSPSCSSGHDQENRSSLDFYTGIFGLDKSRIMDTVNQAMEELIKMATVGEPLWLRSFETGREILNYDEYVREFAVENSSSGKPRRSIEASRDTAVVFVDLPRLVQSFLDVNQWKEMFPCLISKAATVDVICNGEGPGRNGAVQLMFAELQMLTPMVPTREVYFVRFCKQLSAEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSAVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCHAIGASSFHTWTKFTSKTGEDIRISSRKNLNDPGEPLGLILCAVCSVWLPVSPNVLFDFLRDETRRTEWDIMSSGGTVQSIANLAKGQDRGNAVAIQTIKSKENSVWILQDSYTNPYESMVVYASVDITGTQSVMTGCDSSNLAILPSGFSIIPDGLESRPLVISSRQEEKNTEGGSLFTMAFQILTNASPAAKLTMESVDSVNTLVSCTLRNIRTSLQCEDG* 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0152 751 Gene3D - 83 168 - -
Gso15g0152 751 SMART HOX_1 97 159 IPR001356 GO:0003677
Gso15g0152 751 MobiDBLite consensus disorder prediction 59 77 - -
Gso15g0152 751 ProSitePatterns 'Homeobox' domain signature. 130 153 IPR017970 GO:0000981|GO:0006355
Gso15g0152 751 Coils Coil 154 184 - -
Gso15g0152 751 CDD START_ArGLABRA2_like 261 489 - -
Gso15g0152 751 SUPERFAMILY Bet v1-like 259 490 - -
Gso15g0152 751 Pfam Homeodomain 98 153 IPR001356 GO:0003677
Gso15g0152 751 Pfam START domain 269 490 IPR002913 GO:0008289
Gso15g0152 751 SMART START_1 266 490 IPR002913 GO:0008289
Gso15g0152 751 Gene3D - 322 485 IPR023393 -
Gso15g0152 751 ProSiteProfiles 'Homeobox' domain profile. 95 155 IPR001356 GO:0003677
Gso15g0152 751 SUPERFAMILY Homeodomain-like 87 156 IPR009057 -
Gso15g0152 751 CDD homeodomain 102 153 IPR001356 GO:0003677
Gso15g0152 751 ProSiteProfiles START domain profile. 257 493 IPR002913 GO:0008289
Gso15g0152 751 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 19 748 IPR042160 -
Gso15g0152 751 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 19 748 - -
Gso15g0152 751 SUPERFAMILY Bet v1-like 512 715 - -
Gso15g0152 751 Coils Coil 205 225 - -
Gso15g0152 751 MobiDBLite consensus disorder prediction 40 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0152 Gso-Chr15 1280526 1286735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0152 61 750 Homeobox Transcription Factor Family AT1G79840 67.236 0.0 947
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Gso15g0152 START 4.9e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0152 K09338 - gmx:100809926 1446.03