Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0142 ATGGGGAAGGGAACAGGGAGTTTTGGTAAGAGAAGGAACAAGACTCACACTCTCTGTGTGAGGTGTGGCCGCCGCAGCTTCCATCTCCAGAAGAGTCGTTGCGCCGCTTGTGCTTTCCCCGCCGCACGCACTAGGAAATATAACTGGAGCGTCAAGGCAATCCGCAGAAAGACCACCGGAACTGGCAGGATGAGGTACTTGCGTAACGTGCCTCGCCGATTCAAGAGTGGCTTCAGAGAAGGTACCGAAGCTGCACCTAGGAAGAAGGGAGCAGCTACCACTGCATAA 288 0.5486 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAARTRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRKKGAATTA* 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0142 95 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Gso15g0142 95 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Gso15g0142 95 Hamap 50S ribosomal protein L37e [rpl37e]. 2 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Gso15g0142 95 PANTHER RIBOSOMAL PROTEIN L37 1 95 - -
Gso15g0142 95 PANTHER 60S RIBOSOMAL PROTEIN L37 1 95 - -
Gso15g0142 95 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Gso15g0142 95 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0142 Gso-Chr15 1226333 1227527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0142 1 95 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 86.316 1.81e-57 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0142 K02922 - gmx:100809899 200.29