Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0140 ATGAACGGTGCAGGGAGACAGGGGCTGAGATCTGGTGCGGCGGGGGTGCACCACCAGCGCCAGTACTCCGATAACTTCCTCGACAGCTCATCCAACGGCAACAGGTGGCTCCAGTCGGCTGGCCTTCAACACCTTCAATCCTCCTCCAATCAACTTCCTCCGCTTCAGGACTATAACTTGTACGGCGGTGCACAAGGAGGAAGAATGTACCGGAATGCGCCAAGGAGCTTTAACGGAGGAAACGAGTATTATATGGAGCCTTCCACGCCTCCCGGTGGTTACCGTGCTTCGATGCAGAAAAAGAATGGCGAAGATTTGTCCGGTGATTTCAGCCCCGGCTTGTTGGATCTGCAGTCCTTCGACACCGAGCTTCTTCCTCCCGAGCTGCCAGTCTCCAATGCATATGATGCCAACTCCCTGTATCAACCTGGCCGGGGTAGAAGCTTTGATGACTCTGAAACTTACATGCTGAGCAAACAGACTGGCAGAGCTCGTGCTCCTGAAAACATATTGAAAAGTCTCCCTGCAGACAAAGAGAAATCTAATTCTGTAGCAAAGATTAAAGTGGTGGTTCGTAAAAGACCAATGAATAAGAAGGAATTAGCAAAAAATGAGGAGGACATCATAGAAACATATTCCAATTCTTTAACAGTGCACGAGACTAAACTGAAGGTTGACCTAACTCAGTATGTAGAAAAGCATGAATTTGTCTTTGATGCTGTTTTGAATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACAGTAGAGCCCATAGTTCCAATAATATTTGAACGCACTAAGGCAACTTGCTTTGCATACGGGCAAACAGGAAGTGGAAAAACTTACACAATGAAGCCACTGCCACTTAAAGCATCAAGGGACATCCTTAGATTGATGCATCATACTTACAGGAACCAGGGATTTCAATTGTTTGTGAGCTTCTTTGAAATATATGGTGGCAAGCTCTTTGATCTCCTTAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAGTACCGAGTATCGGATGTGGAGAACATAAAAGACCTGATTGAGAAAGGAAATTCCACAAGAAGTACAGGCACCACAGGTGCAAATGAGGAATCATCACGGTCACATGCAATACTTCAGCTTGCTATCAAGAGGTCAGTTGATGGCAATGAATCCAAACCTCTCCGTTTGGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGCGAACGTGGAGCAGATACCACTGATAATGACAAACAGACAAGAATAGAAGGTGCTGAGATCAATAAGAGCTTACTTGCCCTAAAGGAATGCATAAGAGCTCTGGACAATGACCAAGGACACATCCCTTTCAGAGGCAGTAAACTGACTGAAGTTTTGAGGGATTCATTTGTTGGCAACTCCCGCACCGTTATGATTTCATGCATATCACCAAGCACTGGTTCATGTGAACATACTCTGAATACATTAAGATATGCTGACAGGGTAAAAAGCCTATCGAAAGGGAACAATTCAAAGAAGGATGTTTTATCGTCAAATTTCAACCTTAAAGAATCAAGTACAGTTCCCTTATCTTCTGTTACTGGGTCAGCCTATGAGGATCGCGTGACAGATGGATGGCCTGATGAAAATGAAGGGGATGATTTTAGCCCCTCTGAAGAGTATTACGAGCAGGTGAAACCACCATTGAAGAAAAATGGAAAGATGGAATCATATGCTACAACAGATGACAAATTGAAGAAACCCAGTGGTCAGATCAAATGGAAGGACCTCCCAAAAGTTGAACCTCAAACCACACATGCTGAGGATGATTTAAATGCCCTCCTACAGGAAGAAGAGGACCTTGTAAATGCTCACCGGACACAAGTAGAGGAGACCATGAACATTGTTAGAGAGGAGATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCAGCTGGATGATTACATAACAAGACTAAACGCCATTCTTTCTCAGAAGGCTGCTGGCATCCTGCAGTTGCAAACCCGTTTAGCTCATTTTCAGAAACGTTTAAAGGAGCATAATGTTTTGGTTTCATCTACCGGTTACTAA 2106 0.4435 MNGAGRQGLRSGAAGVHHQRQYSDNFLDSSSNGNRWLQSAGLQHLQSSSNQLPPLQDYNLYGGAQGGRMYRNAPRSFNGGNEYYMEPSTPPGGYRASMQKKNGEDLSGDFSPGLLDLQSFDTELLPPELPVSNAYDANSLYQPGRGRSFDDSETYMLSKQTGRARAPENILKSLPADKEKSNSVAKIKVVVRKRPMNKKELAKNEEDIIETYSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVENIKDLIEKGNSTRSTGTTGANEESSRSHAILQLAIKRSVDGNESKPLRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSTGSCEHTLNTLRYADRVKSLSKGNNSKKDVLSSNFNLKESSTVPLSSVTGSAYEDRVTDGWPDENEGDDFSPSEEYYEQVKPPLKKNGKMESYATTDDKLKKPSGQIKWKDLPKVEPQTTHAEDDLNALLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNQLDDYITRLNAILSQKAAGILQLQTRLAHFQKRLKEHNVLVSSTGY* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0140 701 Gene3D Kinesin motor domain 164 512 IPR036961 -
Gso15g0140 701 MobiDBLite consensus disorder prediction 80 108 - -
Gso15g0140 701 MobiDBLite consensus disorder prediction 543 567 - -
Gso15g0140 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 509 IPR027417 -
Gso15g0140 701 ProSiteProfiles Kinesin motor domain profile. 186 509 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g0140 701 PANTHER KINESIN-LIKE PROTEIN KIN-13B 1 701 - -
Gso15g0140 701 PANTHER KINESIN-RELATED PROTEIN 6 1 701 - -
Gso15g0140 701 CDD KISc_KIF2_like 186 507 - -
Gso15g0140 701 ProSitePatterns Kinesin motor domain signature. 408 419 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso15g0140 701 Coils Coil 701 701 - -
Gso15g0140 701 SMART kinesin_4 184 515 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g0140 701 Pfam Kinesin motor domain 192 508 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g0140 701 PRINTS Kinesin heavy chain signature 266 287 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g0140 701 PRINTS Kinesin heavy chain signature 375 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g0140 701 PRINTS Kinesin heavy chain signature 409 427 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso15g0140 701 PRINTS Kinesin heavy chain signature 459 480 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0140 Gso-Chr15 1214829 1220052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0140 186 509 Calmodulin-binding Proteins AT5G65930 33.832 5.63e-44 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0140 K10393 - gmx:100799100 1400.19