Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0139 ATGGAATTTTGGCCAGAATTTCTTGCTAGTAGTACGGGTAAAGAGTTTGTAGCTGGAGGATTTGGAGGCACTGCTGGTATAATCTCCGGTTACCCATTAGACACGCTCCGTGTGATGCAACAAAACTCCAACAATGGCTCTGCTTTCACCATCCTCAGAAATTTGGTGGCCAAGGAAGGACCAACTACTCTGTACCGTGGCATGGCTGCACCTTTGGCCTCTGTTACCTTTCAGAACGCTATGGTTTTCCAAATTTACGCAGTTCTCTCAAGGGCATTTAGCACGTCCGTTTCTGTTAACGACCCTCCTTCCTACAAGGGTGTTGCTTTAGGGGGATTTTGCTCCGGCGCTTTGCAGAGCATGTTGCTGTCTCCTGTTGAGTTACTTAAAATTCGCCTTCAGCTTCAGAACACAGGCCAATCCACAGAACCACAAAAGGGTCCCATAAGGGTTGCCAACAACATATGGAAAAGAGAGGGTCTTCGTGGCATTTATCGAGGACTTGGCATCACTATACTAAGAGATGCACCTGCGCATGGCCTTTACTTTTGGACATATGAATACGCGAGGGAGAAACTTCACCCAGGTTGCAGAAAAAGTTGTGGAGAGAGCTTGAATACTATGTTGGTATCAGGAGGATTGGCCGGGGTTGTGAGTTGGGTTTTCAGCTACCCTTTGGACGTTATAAAGACAAGATTGCAGGCTCAGACATTTTCTTCGCTGAAATACAAAGGCATTTTGGATTGTCTTCGGAAGAGCGTTGAAGAGGAAGGATACGTTGTTCTATGGCGGGGTTTAGGAACTGCGGTTGCTAGAGCGTTTGTTGTGAATGGTGCTATATTTTCTGCTTATGAGATCACTCTTAGGTGTCTGTTTGACAAATAA 885 0.4599 MEFWPEFLASSTGKEFVAGGFGGTAGIISGYPLDTLRVMQQNSNNGSAFTILRNLVAKEGPTTLYRGMAAPLASVTFQNAMVFQIYAVLSRAFSTSVSVNDPPSYKGVALGGFCSGALQSMLLSPVELLKIRLQLQNTGQSTEPQKGPIRVANNIWKREGLRGIYRGLGITILRDAPAHGLYFWTYEYAREKLHPGCRKSCGESLNTMLVSGGLAGVVSWVFSYPLDVIKTRLQAQTFSSLKYKGILDCLRKSVEEEGYVVLWRGLGTAVARAFVVNGAIFSAYEITLRCLFDK* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0139 294 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Gso15g0139 294 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Gso15g0139 294 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Gso15g0139 294 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Gso15g0139 294 SUPERFAMILY Mitochondrial carrier 12 285 IPR023395 -
Gso15g0139 294 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Gso15g0139 294 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Gso15g0139 294 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 293 - -
Gso15g0139 294 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Gso15g0139 294 Gene3D Mitochondrial carrier domain 8 294 IPR023395 -
Gso15g0139 294 Pfam Mitochondrial carrier protein 109 193 IPR018108 -
Gso15g0139 294 Pfam Mitochondrial carrier protein 208 293 IPR018108 -
Gso15g0139 294 Pfam Mitochondrial carrier protein 11 95 IPR018108 -
Gso15g0139 294 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0139 Gso-Chr15 1209566 1212068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0139 1 294 Antiporters AT1G79900 70.508 8.21e-144 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0139 K15109 - gmx:100801221 584.719