Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0138 ATGAGCACAAGTGTGCTTCCCTCTCTCCTGTTCTTCCTAGTCCTTATCCTCTTGCTACTTGACCCTTCTGAACCCGAAAACGTAGCCATTTACTGGGGTCAAAACGCCGACGAGGGAACTCTTAATGAAACATGTGCAACAGGGACATACTCGCATGTAATCATAGCCTTCCTTTCCACCTTTGGGAATGGCCAGACCCCTCAACTCAGCCTGGCTGATCATTGTGACCCCTCTACTAATGGGTGCACTAAGATTGGGAGAGAGATTAAGAATTGTCAAGAGCAAGGGATCACGGTGATGCTCTCTATTGGAGGAGGATCTGGTAATTACTCTATAACTTCCGATGAGGATGCCAACAATGTGTCCAATTATTTGTGGGATAATTTCTTCGGTGGCTTCTCCTCATCACGCCCATTTGGTGATGCAGTTTTAGATGGCCTTGACTTTGACATCGCGCTGGGTGATAATACATCTTTCATGGCAAATCTTGCACAATATCTCAAATCAAATTCAGATTCACAGACGATACAACAAAAACAACTACCTGCATCTTTGTACTTGTCAGCAGCACCTCAGTGTCCGTTTCCTGATGCTAGGCTGGGTTCGGCCATTGGTACCGGCATTTTTGACTATGTCTGGGTACAATTCTATAACAACCCTTCGTGCAGTTATAGCCAAAACAATTTAGATAACTTTCTAAAATCATGGAGAGAGTGGGCCACATCATTGAAAGTAGGTAAACTGTTTCTGGGGTTACCAGCAGATGAAGCTGCAGCTCCGGCCGGAGGTTATGTTCCGGCTGATGTATTAATGTCTAAGATCTTACCTGAAATAAACAAGTCAACAAATTATGGAGGTCTCATGTTGTGGTCAAGGTACTACGATAAAATTAGTGGATACAGTACCCGCATTCAAAATCCTCTAAGAAATGGGACAGCAAACCCTCTATGCACACGGAAAAGTCAAGCATGTAGGAGCCATGAGGGCGGTTTCGCGGAGCTTCTTGGTTACATGTCCACGCTCGGTATCAAAGTTTATGAAGACGACAACAATGGAACACAGTGCTGTGAGATCATATGTAGGAACAACTGTTCCTGCGACGCGTTTGCTCCCTTAAATCACATTAACAATACTAGTACTGGATGTCAGATATGGCTCAAAGGAACCAAATTTGTTAGAGCTTCTGGAAATATAGCTCTGCCAATCAACGTTTCTGTTGCATTGCTGGAACACAAAGTAAACAGCTGGTGGATTTGGCTCATCGTTGGGGTGGGAGCAGCTTTTGTAATACCTGTGATATTCTATTTATCGCGTGCCTTCCTGAGAAAATACAAAGCAAAAGTGGAGAGAAAAAAGATGCAGAAGAAGTTATTACATGACATTGGAGGTAATGCAATGCTTGCAATGGTGTACGGCAAAACCATAAAAAGTAATAACAAGGGAAAGACTAACAATGAAGTTGAACTATTTGCTTTTGATACCATCGTTGTTGCCACAAACAATTTCTCAGCTGCAAATAAGTTAGGAGAGGGTGGTTTTGGTCCTGTTTATAAGGGAAATCTAAGTGATCAGCAAGAAGTAGCAATAAAGCGACTTTCTAAAAGTTCGGGACAGGGGCTAATAGAGTTTACGAATGAAGCCAAACTCATGGCCAAACTCCAGCACACTAATCTGGTAAAGCTTTTAGGGTTCTGCATCCAGAGAGATGAAAGAATATTGGTCTATGAGTACATGTCTAACAAGAGCTTAGACTTCTACCTATTTGATTCGGCTAGAAAGGATTTGCTAGACTGGGAAAAACGGTTGAACATCATTGGAGGAATTGCTCAAGGACTTCTATACCTTCATAAGTATTCAAGACTAAAGGTGATACATCGGGACCTAAAGGCAAGCAATATATTGCTTGATCACGAGATGAATGCTAAAATATCTGACTTTGGCATGGCTCGAATATTTGGAGTAAGAGTATCAGAAGAAAACACAAATAGAGTTGTTGGTACATATGGATATATGGCTCCAGAGTATGCAATGAAAGGTGTTGTGTCCATCAAAACAGATGTGTTCAGCTTTGGTGTGTTGCTACTAGAGATACTTAGTAGCAAAAAGAATAATAGTCGCTATCATTCGGATCACCCACTCAACCTCATAGGATACGCGTGGCAGCTCTGGAATGCAGGCAGAGCTCTGGAGCTTATAGACTCAACGTTAAATGGATTGTGTTCTCAGAATGAAGTTTTCAGATGTATTCATATTGGCCTCTTGTGTGTACAAGATCAAGCAACGGATAGACCTACAATGGTAGATATTGTTTCATTTCTATCAAATGATACAATCCAACTTCCCCAACCAATGCAGCCAGCATACTTCATCAATGAGGTTGTGGAAGAGTCAGAGCTTCCTTACAACCAGCAAGAATTTCATTCCGAAAATGACGTAACAATTTCTAGTACGCGTGCAAGATAA 2463 0.419 MSTSVLPSLLFFLVLILLLLDPSEPENVAIYWGQNADEGTLNETCATGTYSHVIIAFLSTFGNGQTPQLSLADHCDPSTNGCTKIGREIKNCQEQGITVMLSIGGGSGNYSITSDEDANNVSNYLWDNFFGGFSSSRPFGDAVLDGLDFDIALGDNTSFMANLAQYLKSNSDSQTIQQKQLPASLYLSAAPQCPFPDARLGSAIGTGIFDYVWVQFYNNPSCSYSQNNLDNFLKSWREWATSLKVGKLFLGLPADEAAAPAGGYVPADVLMSKILPEINKSTNYGGLMLWSRYYDKISGYSTRIQNPLRNGTANPLCTRKSQACRSHEGGFAELLGYMSTLGIKVYEDDNNGTQCCEIICRNNCSCDAFAPLNHINNTSTGCQIWLKGTKFVRASGNIALPINVSVALLEHKVNSWWIWLIVGVGAAFVIPVIFYLSRAFLRKYKAKVERKKMQKKLLHDIGGNAMLAMVYGKTIKSNNKGKTNNEVELFAFDTIVVATNNFSAANKLGEGGFGPVYKGNLSDQQEVAIKRLSKSSGQGLIEFTNEAKLMAKLQHTNLVKLLGFCIQRDERILVYEYMSNKSLDFYLFDSARKDLLDWEKRLNIIGGIAQGLLYLHKYSRLKVIHRDLKASNILLDHEMNAKISDFGMARIFGVRVSEENTNRVVGTYGYMAPEYAMKGVVSIKTDVFSFGVLLLEILSSKKNNSRYHSDHPLNLIGYAWQLWNAGRALELIDSTLNGLCSQNEVFRCIHIGLLCVQDQATDRPTMVDIVSFLSNDTIQLPQPMQPAYFINEVVEESELPYNQQEFHSENDVTISSTRAR* 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0138 820 Gene3D Transferase(Phosphotransferase) domain 1 578 782 - -
Gso15g0138 820 SUPERFAMILY Protein kinase-like (PK-like) 485 796 IPR011009 -
Gso15g0138 820 SMART serkin_6 502 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0138 820 PANTHER OS01G0783800 PROTEIN 178 791 - -
Gso15g0138 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Gso15g0138 820 Pfam Glycosyl hydrolases family 18 28 295 IPR001223 GO:0005975
Gso15g0138 820 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 26 311 IPR001223 GO:0005975
Gso15g0138 820 CDD STKc_IRAK 508 773 - -
Gso15g0138 820 Gene3D Glycosidases 26 306 - -
Gso15g0138 820 CDD GH18_hevamine_XipI_class_III 27 306 IPR045321 -
Gso15g0138 820 Pfam PAN-like domain 345 387 IPR003609 -
Gso15g0138 820 ProSiteProfiles Protein kinase domain profile. 502 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0138 820 SUPERFAMILY (Trans)glycosidases 23 303 IPR017853 -
Gso15g0138 820 Pfam Protein tyrosine and serine/threonine kinase 505 773 IPR001245 GO:0004672|GO:0006468
Gso15g0138 820 Gene3D Phosphorylase Kinase; domain 1 475 577 - -
Gso15g0138 820 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 178 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0138 Gso-Chr15 1204930 1208355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0138 492 788 Receptor kinase-like Gene Family AT4G23230 59.259 4.40e-122 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso15g0138 PK_Tyr_Ser-Thr 2.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0138 - - gmx:100794508 1630.92