Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0131 ATGGATGGCATTGAGGATGATGCAAGGTACCCCCATAACCCATATGGTTATGGTTATCAGAATTCTCCATATTCCCCCCCAGTTGATACTGAATATGCCCATGATGATAATGATGAAAATGAACAAGAACAGTTAGAAGGGGATGATGAGGTTGATGTTGATCAAAGTAACAATCTTCAGCTTCCCCAAGAGGATGCTGTTGATGAAGATGGCATGTATGGGGGTGGTGATGAAAATGATGATAACCATGATGATGATGATGATGATGAGGAGGAGGAGGAGGAGGAGGTGGTGGAGGTGGAAGAGAATAAGCAGATTGATTATTATGCCATTAAGAGTGAAGATGAGTTAGAGTGGCACCCAAAAAAGCAAAAGCTAAAGAGTTTGATTTCGACCTATGAACTCGCACCTCGAGTGCCAGCACCATCATCAGTTGCAGCTACTGCTCCCACGGTTCCTAAACCATCTTCTGGGGGTAGGAATTCACTAACTGACTGGACTGAGCAAGAGACTTTTGTTCTTCTTGATGCATGGGGTGATAGGTTTCTTCAACATGGAAGGAAGAGTCTTCGATGTGAGGAATGGCAACAAGTTGCAAAAATGGTATCACAAGTTTCAAAAATTGAAAGGACAGATACTCAGTGTAGAAATCGTCTAGATACATTGAAGAAAAAATACAAGAAGGAGAAGGCTAAATTTCCAGATAGTGATGGTGGAGCTTGCAAATGGGTTTATTTAAAAAGGATGGATGAGCTAATGTCTTCTCCTCCGCAACAAGCTGGTCTCTCTTGTGGTTTAGACTCAGGAGAGTATGTTTTTATGAACACCAGAGTTCATTTGAACCATGCAAATGGGTTGGATGAAATGAAGGATAATCCTGACAATACAGAATCTACTGGCGAAGAAGATTCTGATGGGCCTCAAGCAAAGAAAAGAAAGAAGAGAAGGGGCAGTGGCGAAGCTTCTTCTTTCAGGTTACTTGCTGATTCCATTCAGAAATTCAGTAAGATATATGAGAAGATAGAAAATAGTAAAAGGCAGCAGATGGTGGAACTGGAAAAGATGAGGAAGGATTTCCATAAAGAGTTGGAAAGGCAGAAGAGGCAGATTTTAGAGAATCTGCAGTGTGAGATTTCAAAACTAGAGCAGAGAAATGATGAGAACAATGATTCTGCCGAAAATGGTACTTGA 1191 0.4123 MDGIEDDARYPHNPYGYGYQNSPYSPPVDTEYAHDDNDENEQEQLEGDDEVDVDQSNNLQLPQEDAVDEDGMYGGGDENDDNHDDDDDDEEEEEEEVVEVEENKQIDYYAIKSEDELEWHPKKQKLKSLISTYELAPRVPAPSSVAATAPTVPKPSSGGRNSLTDWTEQETFVLLDAWGDRFLQHGRKSLRCEEWQQVAKMVSQVSKIERTDTQCRNRLDTLKKKYKKEKAKFPDSDGGACKWVYLKRMDELMSSPPQQAGLSCGLDSGEYVFMNTRVHLNHANGLDEMKDNPDNTESTGEEDSDGPQAKKRKKRRGSGEASSFRLLADSIQKFSKIYEKIENSKRQQMVELEKMRKDFHKELERQKRQILENLQCEISKLEQRNDENNDSAENGT* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0131 396 MobiDBLite consensus disorder prediction 149 163 - -
Gso15g0131 396 ProSiteProfiles Myb-like domain profile. 166 223 IPR001005 -
Gso15g0131 396 Pfam Myb/SANT-like DNA-binding domain 165 252 IPR044822 -
Gso15g0131 396 PANTHER OS01G0718900 PROTEIN 69 394 - -
Gso15g0131 396 MobiDBLite consensus disorder prediction 1 107 - -
Gso15g0131 396 MobiDBLite consensus disorder prediction 144 163 - -
Gso15g0131 396 Coils Coil 83 103 - -
Gso15g0131 396 Coils Coil 338 396 - -
Gso15g0131 396 MobiDBLite consensus disorder prediction 70 101 - -
Gso15g0131 396 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 69 394 IPR044823 -
Gso15g0131 396 MobiDBLite consensus disorder prediction 284 322 - -
Gso15g0131 396 Gene3D - 166 228 - -
Gso15g0131 396 MobiDBLite consensus disorder prediction 34 53 - -
Gso15g0131 396 MobiDBLite consensus disorder prediction 284 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0131 Gso-Chr15 1150732 1152699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0131 312 394 Trihelix Transcription Factor Family AT3G14180 40.964 1.84e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso15g0131 Myb_DNA-bind_4 2.2e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0131 - - gmx:100779629 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0131 15 1150732 1152699 Gso11g3673 11 52366867 52368744 GST