Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0129 ATGGGTGTGAACTCCAACAGAGTGGAACACTTTGATAGCCATGAAAGCACCATCAAAATCCAGGACGAGACAATGCAAATCCATGCAGTGCAGTTGCCACCACACCGAACCACACTCCACAAACTCAGACAAAGAGTCTCTGAAATCTTCTTCCCTGATGACCCTCTCTACCGTTTCAAGAACCAAACTTGCTTCAAAAAGTTCCTCCTCGCACTTCAGTATCTCTTCCCCATTTTCCAGTGGGCCCCAAACTACAATCTCACCCTTCTCCGCTCTGACCTCATCTCTGGCCTCACCATTTCCAGCCTCGCCATTCCTCAGGGAATCAGTTATGCGAAGCTTGCCAACTTGCCACCTATTATTGGATTGTATTCGAGTTTTGTGCCCCCATTGATATACTCGCTGCTTGGAAGTTCTAGACATCTTGGTGTTGGGCCTGTTTCCATTGCCTCTTTGGTTATGGGATCAATGTTAAGTGAGAAAATTTCTTACACTCAAGAACCTATTCTCTATCTGGGATTGGCTTTCACCGCCACTTTCTTTGCTGGTGTATTCCAAGCTTCTCTCGGTATATTAAGGTTAGGCTTCGTAATTGATTTTCTGTCGAAGGCAACGCTGGTTGGATTCACAGGCGGTGCTGCCGTTATTGTGTCACTGCAGCAGCTGAAAGGGTTACTTGGAATTGTGCACTTTACCAGCAAGATGCAAATAATTCCTGTTATGATCTCTGTTTTCAAACAAAGACACGAGTGGTCATGGCAAACCATTCTTCTGGGATTCGGCTTCTTGGTCTTCTTGCTGACAACAAGACACATTAGCTTGAGGAAACCAAAACTATTCTGGGTTTCAGCAGCTGCCCCATTGACATCAGTTATTCTGTCGACCATTTTAGTCTTTCTTCTGAGAAATACGACTCATCAAATTTCAGTTATTGGGCACTTACCAAAGGGAGTTAATCCACCATCAGCAAACATGCTATACTTCAATGGTCCTTACTTGGCTCTTGCTATCAAAACTGGCATCATTACAGGGATCTTATCTCTTACTGAAGGAATTGCAGTAGGTAGAACATTTGCTTCACTTAAAAACTACCAGGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTAATGAACATAGCTGGCTCTTGTTCTTCATGTTATGTTACAACAGGATCCTTTTCTCGATCAGCTGTTAACTATAATGCTGGAGCACAGACAACAGTTTCAAATATAATCATGGCTGCAGCTGTTCTAGTGACCCTCCTGTTTCTCATGCCTCTGTTCTACTATACACCAAATGTTGTCTTAGCGGCCATTATCATCACTGCTGTGATTGGTCTAATAGATTATCAATCTGCATACAAATTATGGAAGGTTGACAAACTTGATTTCTTGGCCTGTTTGTGCTCCTTTTTTGGGGTTCTGTTCATTTCAGTGCCTTTAGGCCTTGGTATAGCGGTTATCATATCAGTCTTCAAGATCCTGCTTCATGTCACTCGACCAAACACTTTGGTTTTGGGGAATATACCAGGAACACAAATGTTCCACAACATAAACCAATACATAGAAGCTTTAAGAGTTCCTTCATTTCTCATTTTGGCTGTTGAGTCTCCAATCTATTTTGCTAACTCAACTTATCTTCAAGAAAGGATTCTGAGATGGGTTCGAGAAGAGGAAGAGCATATAAAAGCTAATAATGGAGCTCCATTGAAGTGCATAATTTTAGACATGACAGCTGTCACAGCCATAGACACAAGTGGGCTTGACACTTTATGTGAACTTAGAAAGATGCTGGAGAAGCGATCACTTGAGCTTGTGTTGGCAAATCCTATTGGAAATGTGATGGAAAAATTGCATAAGTCAAATATTTTGGATTCTTTTGGATTAAAAGGAGTCTATCTCACAGTGGGAGAAGCTGTGGCTGACATTTCATCAATCTGGAAAGCTCAGCCTTGA 1959 0.4211 MGVNSNRVEHFDSHESTIKIQDETMQIHAVQLPPHRTTLHKLRQRVSEIFFPDDPLYRFKNQTCFKKFLLALQYLFPIFQWAPNYNLTLLRSDLISGLTISSLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSEKISYTQEPILYLGLAFTATFFAGVFQASLGILRLGFVIDFLSKATLVGFTGGAAVIVSLQQLKGLLGIVHFTSKMQIIPVMISVFKQRHEWSWQTILLGFGFLVFLLTTRHISLRKPKLFWVSAAAPLTSVILSTILVFLLRNTTHQISVIGHLPKGVNPPSANMLYFNGPYLALAIKTGIITGILSLTEGIAVGRTFASLKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTTVSNIIMAAAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQSAYKLWKVDKLDFLACLCSFFGVLFISVPLGLGIAVIISVFKILLHVTRPNTLVLGNIPGTQMFHNINQYIEALRVPSFLILAVESPIYFANSTYLQERILRWVREEEEHIKANNGAPLKCIILDMTAVTAIDTSGLDTLCELRKMLEKRSLELVLANPIGNVMEKLHKSNILDSFGLKGVYLTVGEAVADISSIWKAQP* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0129 652 Pfam Sulfate permease family 90 469 IPR011547 GO:0016021
Gso15g0129 652 Pfam STAS domain 522 640 IPR002645 -
Gso15g0129 652 Gene3D STAS domain 501 646 IPR036513 -
Gso15g0129 652 PANTHER SULFATE TRANSPORTER 16 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso15g0129 652 ProSitePatterns SLC26A transporters signature. 119 140 IPR018045 GO:0008271|GO:0008272
Gso15g0129 652 SUPERFAMILY SpoIIaa-like 522 643 IPR036513 -
Gso15g0129 652 TIGRFAM sulP: sulfate permease 77 640 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso15g0129 652 CDD STAS_SulP_like_sulfate_transporter 522 637 - -
Gso15g0129 652 ProSiteProfiles STAS domain profile. 521 644 IPR002645 -
Gso15g0129 652 PANTHER SLC26A/SULP TRANSPORTER-RELATED 16 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0129 Gso-Chr15 1138935 1144388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0129 1 652 Inorganic Solute Cotransporters AT3G15990 75.994 0.0 1029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0129 K17471 - gmx:100812617 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0129 15 1138935 1144388 Gso11g3675 11 52377192 52382386 GST
Gso15g0129 15 1138935 1144388 Gso8g1721 8 16795745 16800069 PCT
Gso8g1721 8 16795745 16800069 Gso15g0129 15 1138935 1144388 PCT