Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0118 ATGGAGAAAGAAGGTGTTGGGCTTGAAATCACTACTGAGCTAAGGTTGGGCCTTCCCGGTGGGGAATTACCTGACAAGAACGAGAAGATGAAGAAGAGGGTGTTCTCGGAGATTAATCAAGGTGATGAAAACAGCTCCTCCGAAGAAGATCGCAAAATCCAAACCAAAAACCAAGTGGTTGGGTGGCCTCCGGTGTGTTCGTACCGCAAGAAGAACACCATCAATGAAACCAAAATGTACGTCAAAGTTAGCATGGACGGGGCTCCTTTCTTGCGTAAAATTGATTTGGCTATGCACAAGGGATATTCGGAGCTAGCCTTGGCCTTGGAGAAGTTCTTCGGTTGCTATGGAATTGGCTCAGCGTTGAAGGATGAGGAGAATGTTGAACAAGTTCCCATATACGAGGACAAAGATGGTGACTGGATGCTCGTTGGAGATGTTCCTTGGGAGATGTTTATTGAGTCATGCAAGAGGTTGAGGATTATGAAGAGATCAGATGCAAAGGGCTTCGATCTGCAACCAAAAGGGTCTTTAAAGGGATTTATAGAAGGCGTGACAAAATGA 564 0.4557 MEKEGVGLEITTELRLGLPGGELPDKNEKMKKRVFSEINQGDENSSSEEDRKIQTKNQVVGWPPVCSYRKKNTINETKMYVKVSMDGAPFLRKIDLAMHKGYSELALALEKFFGCYGIGSALKDEENVEQVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFDLQPKGSLKGFIEGVTK* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0118 187 Gene3D - 72 175 - -
Gso15g0118 187 SUPERFAMILY CAD & PB1 domains 72 163 - -
Gso15g0118 187 ProSiteProfiles PB1 domain profile. 78 166 IPR000270 GO:0005515
Gso15g0118 187 Pfam AUX/IAA family 32 170 IPR033389 -
Gso15g0118 187 PANTHER AUXIN-RESPONSIVE PROTEIN IAA6 4 170 - -
Gso15g0118 187 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 170 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0118 Gso-Chr15 1016947 1020568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0118 75 185 B3 DNA Binding Superfamily AT4G23980 35.135 9.38e-11 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gso15g0118 AUX_IAA 3.1e-44 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0118 K14484 - gmx:100811879 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0118 15 1016947 1020568 Gso11g3686 11 52494283 52497500 GST
Gso8g1728 8 16884004 16888296 Gso15g0118 15 1016947 1020568 PCT