Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0082 ATGGTGCAATCAAAGAAGTTCAGAGGTGTCAGGCAACGCCATTGGGGCTCGTGGGTTTCTGAGATTCGTCACCCATTATTGAAAAGAAGGGTGTGGCTTGGGACATTTGGAACAGCTGAAGAAGCAGCAAGAGCATATGATGACGCAGCCATTTTGATGAGTGGCAGAAACGCCAAAACAAACTTCCCAGTTGCGGATAATCAAAAGGGCAATCACATTTCTAGTTCTTCCCCAACATTTTCTTCAGCTCTCAATGCAAAGCTAAAGAAGTGCTGCAAGTCCCTTTCACCTTCCCTCACTTGCCTAAGGCTTGACACCGAGAATTCCCACTTCGGAGTGTGGCAAAAGCGAGCAGGGCCTCGTTCTGAATCAAACTGGATTATGACAGTTGAGTTGGAACGGAGTAATGTTAATGTTGTATCTGATTCACAAGTAGTGTCAGTGCCAGAGAAGGTTGAAAGCAAGAATGGGTTGGATGAGGAGCAGAAGATTGCACTGCAGATGATAGAAGAGCTTCTGAATAGGAACTGA 531 0.4576 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFGTAEEAARAYDDAAILMSGRNAKTNFPVADNQKGNHISSSSPTFSSALNAKLKKCCKSLSPSLTCLRLDTENSHFGVWQKRAGPRSESNWIMTVELERSNVNVVSDSQVVSVPEKVESKNGLDEEQKIALQMIEELLNRN* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0082 176 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Gso15g0082 176 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Gso15g0082 176 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Gso15g0082 176 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Gso15g0082 176 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 176 - -
Gso15g0082 176 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Gso15g0082 176 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Gso15g0082 176 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Gso15g0082 176 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Gso15g0082 176 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WIN1-LIKE 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0082 Gso-Chr15 680318 682061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0082 1 176 AP2-EREBP Transcription Factor Family AT1G15360 59.296 2.50e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso15g0082 AP2 2.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0082 - - gmx:100778381 322.398