Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0075 ATGGGCATATTCAGATGTGGGGCCTTGTTTTTCTATGTGCTCCTTTTGTTTAGAACCTGCCTGGCCAAAGATCAACATGTTAGTCAGATATATCCTGGCTTCAGTGCATCTCAGCCAGATTGGAGCGACCATAATGGTTTTTTCTTGCTATCCAACAGCTCGGCGTTCGCTTTTGGGTTCTTCACCACTCTTGATGTTTCATCGTTTGTTCTAGTTGTCATGCACTTAAGCAGCTACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTTGTTGGGACTTCTGATAAATTTGTGCTTGACCGTGATGGGAATGCATATTTGGAAGGTGGGAATAGTGTAGTATGGGCAACAAATACAACAGGACAAAAAATAAGATCTATGGAGTTGCTTGACTCAGGGAATTTGGTGTTGCTTGGGGAAAATGGGACAGCTATTTGGCAAAGTTTTAGCCATCCCACTGATACTCTTTTGCCCAGACAAGACTTTGTGGATGGAATGACGCTCAAAAGCTTCCACAACAGCTTGAACATGTGTCATTTTCTTAGTTACAAGGCAGGTGATTTGGTTCTCTATGCAGGATTTGAAACTCCACAAGTGTACTGGTCCCTATCAGGAGAACAAGCTCAGGGAAGCTCAAGAAATAACACTGGTAAGGTTCACTCAGCGTCTTTGGTGTCCAATTCATTGAGTTTTTATGACATAAATAGAGCTTTGCTGTGGAAAGTTGTCTTCTCTGAGCACTCAGATCCCAAGTCATTGTGGGCTGCTACCTTGGATCCAACTGGTGCAATCACTTTTTATGATCTTAACAAAGGGAGGGCTCCAAACCCTGAGGCAGTTAAGGTACCACAAGACCCTTGTGGCATTCCTCAGCCTTGTGATCCTTATTATGTTTGCTTCTTTGAAAACTGGTGCATCTGTCCCAAACTTCTCAGAACTCGCTTTAATTGCAAACCTCCCAACATCTCCACCTGTTCTAGGAGTTCAACAGAACTTTTATATGTTGGTGAAGAGCTTGATTATTTTGCTCTCAAGTACACTGCTCCGGTTTCAAAATCAAACCTGAATGCTTGCAAAGAGACTTGTTTAGGAAACTGTTCATGCCTTGTGCTTTTCTTTGAAAACAGTACCGGAAGATGCTTTCATTTTGATCAGACTGGGAGTTTCCAACGCTATAAGAGGGGTGCCGGTGCCGGTGGTTATGTTTCGTTCATGAAGGTCTCCATTAGTAGTGCTAGTGATGATGGACATGGCAACAAAAATAGAAGGAATGACGCGGTGCTAGTTGTTGTCATAGTAGTTCTCACAGTTCTGGTTATAGTTGGTCTTATAATGGGATTCTGGTACTTTTACAAGAGGAAGAAGAATGTTGCTAAGTATCCTCAAGACGACTTGGATGAAGATGATGATTTCTTGGACAGTCTCTCTGGGATGCCCGCACGTTTTACTTTTGCTGCTCTTTGTAGAGCAACTAAGGACTTTTCCACAAAAATTGGGGAAGGAGGTTTTGGCTCAGTGTATCTAGGTGTGCTTGAAGATGGCACCCAGTTGGCTGTGAAAAAATTGGAAGGTGTTGGACAAGGTGCAAAAGAGTTTAAAGCAGAAGTGTCCATAATTGGAAGTATTCATCATGTTCATCTTGTCAAACTCAAAGGGTTCTGTGCCGAGGGTCCTCATCGCCTTCTTGTCTATGAATACATGGCAAGGGGTTCTTTGGACAAATGGATCTTCAAGAACAGTGACAACACCTTCTTGTTGAACTGGGACACGAGGTACAACATTGCAATAGGCACGGCTAAGGGATTGGCCTATCTCCATGAGGAGTGTGAAGTGAGGATTATCCACTGTGATATTAAGCCGCAAAATGTTCTTCTTGATGATAACTTCACTGCTAAGGTTTCAGATTTTGGATTGGCTAAGCTAATGAGCCGTGAGCAGAGCCATGTGTTCACAACTCTAAGGGGTACAAGGGGTTATCTAGCACCAGAATGGATAACTAACTATGCAATTTCGGAGAAGAGTGATGTGTTCAGCTATGGCATGCTATTGCTTGAGATAGTTGGAGGGAGGAAGAACTATGATCAATGGGAAGGGGCAGAAAAAGCGCATTTTCCTTCTTATGTGTTCAGAATGATGGATGAAGGGAAACTGAAAGAGGTTCTTGATCCAAAGATAGATATTGATGAGAAGGATGAAAGGGTTGAGGCTGCTCTTAAAGTTGCTCTTTGGTGCATACAAGATGACGTGAGTTTGAGGCCTTCCATGACTAAGGTAGCTCAGATGCTTGATGGTTTGTGCCCTGTACCTGATCCCCCCTCATTATCTCAATCTGGTACTTATTCAGCTTTCATGAAATTGAGTAGTGGAGAAGCTACTTCATCGGGACAGGCTAGTTTTTTTAGTAATGTACCCATGTCATGTGTTCAATTATCAGGACCAAGATGA 2445 0.4294 MGIFRCGALFFYVLLLFRTCLAKDQHVSQIYPGFSASQPDWSDHNGFFLLSNSSAFAFGFFTTLDVSSFVLVVMHLSSYKVVWTANRGLLVGTSDKFVLDRDGNAYLEGGNSVVWATNTTGQKIRSMELLDSGNLVLLGENGTAIWQSFSHPTDTLLPRQDFVDGMTLKSFHNSLNMCHFLSYKAGDLVLYAGFETPQVYWSLSGEQAQGSSRNNTGKVHSASLVSNSLSFYDINRALLWKVVFSEHSDPKSLWAATLDPTGAITFYDLNKGRAPNPEAVKVPQDPCGIPQPCDPYYVCFFENWCICPKLLRTRFNCKPPNISTCSRSSTELLYVGEELDYFALKYTAPVSKSNLNACKETCLGNCSCLVLFFENSTGRCFHFDQTGSFQRYKRGAGAGGYVSFMKVSISSASDDGHGNKNRRNDAVLVVVIVVLTVLVIVGLIMGFWYFYKRKKNVAKYPQDDLDEDDDFLDSLSGMPARFTFAALCRATKDFSTKIGEGGFGSVYLGVLEDGTQLAVKKLEGVGQGAKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLDKWIFKNSDNTFLLNWDTRYNIAIGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFTAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVFSYGMLLLEIVGGRKNYDQWEGAEKAHFPSYVFRMMDEGKLKEVLDPKIDIDEKDERVEAALKVALWCIQDDVSLRPSMTKVAQMLDGLCPVPDPPSLSQSGTYSAFMKLSSGEATSSGQASFFSNVPMSCVQLSGPR* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0075 814 SMART blect_4 40 152 IPR001480 -
Gso15g0075 814 PIRSF SRK 3 811 IPR024171 GO:0004674
Gso15g0075 814 Gene3D - 42 151 IPR036426 -
Gso15g0075 814 ProSiteProfiles PAN/Apple domain profile. 325 396 IPR003609 -
Gso15g0075 814 SUPERFAMILY Protein kinase-like (PK-like) 476 762 IPR011009 -
Gso15g0075 814 Gene3D Phosphorylase Kinase; domain 1 463 566 - -
Gso15g0075 814 CDD STKc_IRAK 498 765 - -
Gso15g0075 814 ProSitePatterns Protein kinases ATP-binding region signature. 498 521 IPR017441 GO:0005524
Gso15g0075 814 Pfam Protein kinase domain 495 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0075 814 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 814 - -
Gso15g0075 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 203 IPR036426 -
Gso15g0075 814 Gene3D Transferase(Phosphotransferase) domain 1 567 765 - -
Gso15g0075 814 ProSiteProfiles Bulb-type lectin domain profile. 34 150 IPR001480 -
Gso15g0075 814 SMART serkin_6 492 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0075 814 ProSiteProfiles Protein kinase domain profile. 492 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0075 814 CDD B_lectin 45 152 IPR001480 -
Gso15g0075 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Gso15g0075 814 Pfam D-mannose binding lectin 81 162 IPR001480 -
Gso15g0075 814 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 2 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0075 Gso-Chr15 636069 639206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0075 433 772 Receptor kinase-like Gene Family AT5G20050 44.290 8.95e-92 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso15g0075 Pkinase 1.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0075 - - gmx:100816004 1604.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0075 15 636069 639206 Gso11g3723 11 52820360 52823401 GST