Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0058 ATGTCTCACAGAAAGGATACCAACAATTATTCTTCCTTACCCATTAGCTCGTATCTAGAATTGCAGCCTCAAAATGATTCCTCAAAATCCTTACAAAGGCCTACTTTTGACGAATCCGAGGTGTATTTGGGATCCAAGGTCGATCACGACGACGATGACGATTTGGAAATCGACATCGATAATTATCCCCTTGTCGTTATGGGGCCCAATCACGGTTCTGGGATACCTGGTGCTGTTTTCAATTTAACAACCACTGTTATTGGGGCAGGGATTATGGCCCTCCCTGCCACTATGAAAGTTCTAGGAGTGGTTTTGGGGATTGTTTTGATCATTATTATGGGAATTTTGTCTGAAATTAGCGTCGAATTGTTGGTGAGGTTTTCTGTTTTGTGTAAGGCATCCTCCTATGGGGAGGTTGTTCAACATGCTATGGGAAGGCCTGCCAGGATTTTGTCAGAAATTTGTATTATTGTCAACAATGCTGGTGTTTTGGTGGTTTACTTGATAATCATAGGGGATGTTATGTCTGGTTCCGTTCACCATTTGGGGGTTTTTGATCAGTTAATGGGGAACGGGGTGTGGGATCAGAGGAAGCTTGTCATTTTTGTTGTCATGGTGGTTTTCCTTGCCCCCCTTTGTTCACTTGACAAGATTGATTCGTTGAGCTTGACTTCGGCCGCCTCAGTGGCTCTTGCTATCTTGTTTGTCCTTGTCACTTTTACTGTTGCTTTCATCAAGCTCGTGGAAGGACGGATTGATGCTCCCAGGATGGCTCCTGATTTTAGCTCTAAAACTGCCATCTTGGATTTGCTTGTCGTGATTCCCATCATGACTAATGCATATGTTTGCCATTTTAATTTGCAGCCGATATATAACGAGCTTGAACAGCGGTCTCCTCAGAAGATGAACCGAGTTGGAAGGTACACCACAATTTTGTGCATCCTAGTTTATTCTTCCACTGCCATATCGGGTTACCTGCTCTTTGGGAAAGATACTGAGTCTGATGTGCTGACTAATTTTGATAAGGATCTTGGAATTCGGTTTAGCTCAGCCTTGAACTATATTGTCCGGGTTGGCTACATTCTTCATTTGATACTTGTTTTCCCTGTAATTCATTTCTCACTACGCCAAACAGTGGATGCACTAGTGTTTGAAGGATCACCACCTCTATCAGAAAGTAGGAAGAGATCTCTGGGGTTGACTGTGGTTCTGTTGGTCCTCATATATATTGGCTCTACCATGATTCCAAGCATATGGACAGCTTTTAAGTTCACCGGGGCAACCACGGCTGTTTCATTGGGTTTTATATTTCCTTCTCTTGTTGCATTGAGATTAAGTCATCAGGGGGATTTAAGCTATGGGGAAAGGATTTTATCTTGGTTGATGTTAGTATTAGCTGTGACTGTTAGCATAGTAGGAGTTGTTGGCAATATCTATAGCCTTGAGAGTAAGTCTTAG 1458 0.4273 MSHRKDTNNYSSLPISSYLELQPQNDSSKSLQRPTFDESEVYLGSKVDHDDDDDLEIDIDNYPLVVMGPNHGSGIPGAVFNLTTTVIGAGIMALPATMKVLGVVLGIVLIIIMGILSEISVELLVRFSVLCKASSYGEVVQHAMGRPARILSEICIIVNNAGVLVVYLIIIGDVMSGSVHHLGVFDQLMGNGVWDQRKLVIFVVMVVFLAPLCSLDKIDSLSLTSAASVALAILFVLVTFTVAFIKLVEGRIDAPRMAPDFSSKTAILDLLVVIPIMTNAYVCHFNLQPIYNELEQRSPQKMNRVGRYTTILCILVYSSTAISGYLLFGKDTESDVLTNFDKDLGIRFSSALNYIVRVGYILHLILVFPVIHFSLRQTVDALVFEGSPPLSESRKRSLGLTVVLLVLIYIGSTMIPSIWTAFKFTGATTAVSLGFIFPSLVALRLSHQGDLSYGERILSWLMLVLAVTVSIVGVVGNIYSLESKS* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0058 485 PANTHER AMINO ACID TRANSPORTER AVT6E 47 484 - -
Gso15g0058 485 Pfam Transmembrane amino acid transporter protein 73 476 IPR013057 -
Gso15g0058 485 PANTHER AMINO ACID TRANSPORTER 47 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0058 Gso-Chr15 511197 513364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0058 8 485 Amino Acid or Auxin Permease AAAP Family AT1G80510 72.428 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0058 - - gmx:100813328 892.493