Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0044 ATGAATCTTCTTGTTCTGTTCCTGCCTATTTGGGTGTTAAGCATTTCTTTTTCCTCACCAACTCTTCTTGCTGCTTCCTCCATTTCTCTTTCTCAAAATGCACAAGCTGAATCTCCAGGAATTCAGGAGGTTAGAACAGTGCATCACCAGAATTTGAATAAGAGAATTCTAATCGCACTAGTTGCTTGTTCTACTCTTCTTGGTGGAGTCTTCCTATTCTTGTTATATGTCTGGTTCCGTCGACATAAAAACTTAAGATGCTCCAAAAGTATAAGCCAAGAAACCATTGAGACTGCAAAAGGGGAAACCATAAGCTCGGTTAATGCTAAACTGAACTACTCTAGGATGGCAGATAAAAGGAGTTCAGTTGCCATTTTTGACTATCAGCTGTTAGAGGCTGCAACAAACAGCTTTAGCACAAGTAATATTATGGGTGAGAGTGGTTCTAGAATTGTTTACAGAGCTCGTTTTGATGAACATTTCCAGGCAGCTGTGAAGAAAGCAGAGAGTGATGCTGATAGAGAATTTGAGAATGAAGTGAGTTGGTTGAGCAAGATAAGGCATCAAAATATCATAAAACTTATGGGTTATTGTATTCATGGTGAATCGAGGTTTCTTGTTTATGAATTGATGGAGAATGGATCTCTGGAAACTCAATTGCATGGGCCTAATTGGGGGTCATCTTTAACTTGGCATCTCAGGTTAAGAATTGCTGTTGACGTTGCCAGAGCATTAGAATATCTCCACGAGCACAACAATCCTCCTGTGGTTCATAGAGACTTAAAATGCTCTAATGTTCTTCTGGATTCTAACTTTAATGCCAAGTTATCAGATTTTGGATTTGCTGTGGTTTCGGGAATGCAACACAAGAACATTAAGATGTCAGGAACTTTAGGATATGTGGCTCCTGAGTACATATCACATGGTAAACTAACTGATAAGAGCGATGTCTATGCTTTTGGGGTTGTCCTTCTAGAACTCCTAACCGGGAAAAAACCCATGGAGAACATGACCTCGAACCAATATCAATCCCTTGTATCATGGGCCATGCCTCAGCTAACCGACAGATCCAAGCTTCCTAGTATTCTGGATCCTGTTATCAGAGACACAATGGACTTGAAGCATTTGTATCAGGTTGCTGCAGTGACTGTACTCTGCGTGCAATCAGAACCAAGTTATAGGCCACTAATAACAGATGTGTTACACTCTCTTATCCCTTTGGTACCCGTTGAGCTTGGAGGGTCACTTAGAGTTACTGAACCAATCAGCTCAGAGAACTCTCATTGA 1287 0.4079 MNLLVLFLPIWVLSISFSSPTLLAASSISLSQNAQAESPGIQEVRTVHHQNLNKRILIALVACSTLLGGVFLFLLYVWFRRHKNLRCSKSISQETIETAKGETISSVNAKLNYSRMADKRSSVAIFDYQLLEAATNSFSTSNIMGESGSRIVYRARFDEHFQAAVKKAESDADREFENEVSWLSKIRHQNIIKLMGYCIHGESRFLVYELMENGSLETQLHGPNWGSSLTWHLRLRIAVDVARALEYLHEHNNPPVVHRDLKCSNVLLDSNFNAKLSDFGFAVVSGMQHKNIKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGKKPMENMTSNQYQSLVSWAMPQLTDRSKLPSILDPVIRDTMDLKHLYQVAAVTVLCVQSEPSYRPLITDVLHSLIPLVPVELGGSLRVTEPISSENSH* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0044 428 PANTHER OS01G0253100 PROTEIN 28 419 IPR045271 GO:0004714|GO:0006468
Gso15g0044 428 Gene3D Transferase(Phosphotransferase) domain 1 211 409 - -
Gso15g0044 428 Gene3D Phosphorylase Kinase; domain 1 98 210 - -
Gso15g0044 428 SMART serkin_6 138 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso15g0044 428 SUPERFAMILY Protein kinase-like (PK-like) 114 404 IPR011009 -
Gso15g0044 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Gso15g0044 428 PANTHER RECEPTOR-LIKE KINASE 28 419 - -
Gso15g0044 428 Pfam Protein tyrosine and serine/threonine kinase 152 361 IPR001245 GO:0004672|GO:0006468
Gso15g0044 428 ProSiteProfiles Protein kinase domain profile. 138 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0044 Gso-Chr15 405078 409900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0044 1 350 Receptor kinase-like Gene Family AT1G80640 47.154 6.17e-107 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Gso15g0044 PK_Tyr_Ser-Thr 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0044 - - gmx:100811188 841.262