Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0038 ATGGACAATAACGAGGAAATACCCTCAACACCCGCAACACCAGGCACTCCTGGTGCACCTCTTTTTGGTGGCTTCAGTAATGGTAGGAACAATAATAGCAAGAAGTCCCTCCTGAAGAGTTGTAGGTGCTTCAGTGTGGAGGAGTGGAGCTTAGAAGATGGAGGGCTACCGGCAGTGTCATGCTCATTGCCACTGCCATCGCCTCCACCGGTAGTCCCTCTTGCAAGAAAGATTGGAGCGGAGTTCATAGGGACCTTCATCCTCATGTTCGCAGGCACTGCCGCTGCCATTGTCAACCAAAAGACAAATGGCTCTGAGACCCTTATTGGATGTGCTGCCACCACTGGTCTCGCCGTCATGATCGTGATCCTCGCCACCGGCCACATCTCCGGTGCTCATCTCAACCCTGCTGTCACCATTTCCTTCGCTGCATTAAAGCACTTCCCTTGGAAGCATGTGCCCATGTATATTGGTGCACAAGTTTTGGCATCTATATGCGCCGGATTTGCTCTCAAGGGGGTTTATCACCCTTTCATGAGTGGAGGAGTCACCGTTCCTTCCGGAGGATACGGCCAATCTTTTGCTTTGGAGTTCATTATTGGCTTCAACCTCATGTTCGTTGTCACTGCAGTCGCCACCGACACCAGAGCTGTGGGAGAACTCGCGGGAATCGCGGTGGGAGCGACTGTGATGCTCAATATACTCATAGCAGGGCCAGTATCCGGGGGCTCAATGAACCCAGTAAGAACACTAGGTCCTGCTGTGGCGGCAAACAACTACAAAGCCATATGGGTCTATCTAGTAGCTCCCATACTTGGAGCTTTAGCTGGGGCAGGTACCTACACTGCAGTGAAGCTGCCTGAAGAAGATGATGACGCCAAGGCAAAGACTTCAATCAGCAGCTTCAGAAGGTGA 915 0.5191 MDNNEEIPSTPATPGTPGAPLFGGFSNGRNNNSKKSLLKSCRCFSVEEWSLEDGGLPAVSCSLPLPSPPPVVPLARKIGAEFIGTFILMFAGTAAAIVNQKTNGSETLIGCAATTGLAVMIVILATGHISGAHLNPAVTISFAALKHFPWKHVPMYIGAQVLASICAGFALKGVYHPFMSGGVTVPSGGYGQSFALEFIIGFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPVSGGSMNPVRTLGPAVAANNYKAIWVYLVAPILGALAGAGTYTAVKLPEEDDDAKAKTSISSFRR* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0038 304 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso15g0038 304 PRINTS Major intrinsic protein family signature 115 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso15g0038 304 PRINTS Major intrinsic protein family signature 152 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso15g0038 304 PRINTS Major intrinsic protein family signature 196 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso15g0038 304 PRINTS Major intrinsic protein family signature 227 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso15g0038 304 PRINTS Major intrinsic protein family signature 264 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso15g0038 304 MobiDBLite consensus disorder prediction 1 25 - -
Gso15g0038 304 CDD MIP 76 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso15g0038 304 PANTHER BNAA02G36290D PROTEIN 6 297 - -
Gso15g0038 304 Pfam Major intrinsic protein 74 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso15g0038 304 PANTHER AQUAPORIN NIP2-1 6 297 IPR034294 -
Gso15g0038 304 ProSitePatterns MIP family signature. 133 141 IPR022357 -
Gso15g0038 304 Gene3D Glycerol uptake facilitator protein. 69 296 IPR023271 -
Gso15g0038 304 SUPERFAMILY Aquaporin-like 73 291 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0038 Gso-Chr15 355819 360045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0038 3 304 Major Intrinsic Protein MIP AT1G80760 75.563 5.06e-164 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0038 K09874 - gmx:100815637 523.087