Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0036 ATGCCTTCTGCAGAAGCTTCCTCCGAAACCATTTGTGTCACCGGCGCTGGTGGCTTCATCGCCTCTTGGATGGTCAAACTCCTCTTGGAAAAAGGCTACACTGTCCGAGGAACCCTCAGAAATCCAGATGATCCCAAGAACGGGCACTTGAAGGAGTTTGAAGGAGCCTCCGAGAGGTTAACTCTGCATAAGGTTGACCTCCTTCATCTTGACTCCGTTAGATCAGTTATTAACGGTTGCCATGGTGTCTTTCACACTGCTTCTCCCGTCACCGATAACCCCGAAGAAATGGTGGAGCCAGCGGTGAGTGGAGCTAAGAATGTGATCATAGCTGCTGCAGAGGCTAAAGTTAGACGTGTGGTGTTCACCTCATCCATTGGTGCCGTCTATATGGACCCCAGTAGGAGCATCGATTTGGTGGTTGACGAGTCCTGTTGGAGTGATTTGGAATATTGCAAGAACACCAAGAATTGGTATTGCTATGGGAAGGCTGTGGCTGAACAAGCAGCATGGGACACAGCAAAAGAGAATGGGGTGGACTTGGTTGTAGTGAACCCAGTTTTGGTTCTTGGACCATTACTGCAACCCACAATCAATGCTAGTACAATTCACATCCTCAAGTACCTCACTGGCTCTGCTAAGACCTATGCAAATGCCACACAGGCTTATGTGCATGTTAGGGATGTGGCATTGGCCCACATACTTGTTTATGAGAAGCCTTCTGCCTCTGGTAGATACCTATGTGCCGAAAGCTCCCTCCACCGTGGAGAATTAGTTGAAATTCTCGCCAAGTATTTCCCGGAGTACCCAGTTCCCACCAAGTGTTCAGATGAAAAGAATCCGAGAGCAAAACCCTACACTTTTTCAAATCAAAAGCTGAAAGATTTGGGATTGGAATTCACTCCAGTGAGTCAGTGTCTATATGAAACAGTGAAGAGCCTGCAGGAGAAAGGCCACCTTCCAGTTCCTGCAAAGCAGCAGGAAGAAGATTCAACTACCGTGAAATCCTAA 1011 0.4777 MPSAEASSETICVTGAGGFIASWMVKLLLEKGYTVRGTLRNPDDPKNGHLKEFEGASERLTLHKVDLLHLDSVRSVINGCHGVFHTASPVTDNPEEMVEPAVSGAKNVIIAAAEAKVRRVVFTSSIGAVYMDPSRSIDLVVDESCWSDLEYCKNTKNWYCYGKAVAEQAAWDTAKENGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYEKPSASGRYLCAESSLHRGELVEILAKYFPEYPVPTKCSDEKNPRAKPYTFSNQKLKDLGLEFTPVSQCLYETVKSLQEKGHLPVPAKQQEEDSTTVKS* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0036 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 315 IPR036291 -
Gso15g0036 336 CDD FR_SDR_e 12 298 - -
Gso15g0036 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 324 - -
Gso15g0036 336 Pfam NAD dependent epimerase/dehydratase family 11 242 IPR001509 -
Gso15g0036 336 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 5 324 - -
Gso15g0036 336 Gene3D - 2 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0036 Gso-Chr15 334363 337277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0036 11 274 Monolignol Biosynthesis Gene Families AT1G80820 74.621 8.16e-143 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0036 K09753 - gmx:100789070 667.151