Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso15g0033 ATGCTTCTCTCACTTCACAAACTTAATTTGAACCTCTCACCTTGCTCATCATCTGGAATTTATTTGGCAGTCATGGATTATTCATCATGGATTAACACTTCCTTGGATCTCAACATTAATCTCCATAGGGTTCACGAAGAACTTCCCAAAAAGCAGGTGGAAAACAATTTTTTCTCATTGGATTTGGAGGTGAAGAAATCTTCTGTAAAACAAGAGTCAGCAGGTGCCTTGGCGGAGGAACTGAAGCGGGTGAGTGCAGAAAACAAGAAGTTAACCGAAATGCTCACAGAGATGTGTGAGAACTACAACACTTTGCGAAGCAATTTGATGGAATACATGAGGAAGAATCCTGATAAGGAGCTCAGCTCATCAAAGAAAAGGAAGTCTGCAAGCAGCAACAACAATAGTACTATTCCAATGGGAGTCAACGGAACCTCTGAAAGCAGCTCAACCGATGAGGAATCCTGCAAGAATCCAAAGGAAGACATGAAGACAAAAATTTCAAGAGTTTATATGAGGACAGAAGCATCTGATACAAGCCTTATTGTGAAAGATGGATATCAATGGAGGAAATATGGACAAAAGGTGACCAGAGATAACCCTTCTCCAAGAGCATATTTCAAGTGCTCTTTTGCTCCAAGCTGCCCGGTCAAAAAGAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTTGCAACTTATGAAGGAGAGCACAATCATACACACCCTTCTCAAATGGAGGTAACAACAGGTTCCAACCGTTCAGTATCATGTTCAGCGTCTCTTAGCTCTTCCGCACCAACAGTTACCCTTGACTGGACAAAATCCAAGTCCAGCAGTGAGTCTAAGAATGTAAATCCCAAAACTGAATCACCAGAAGTCCCGCAGGTTTTGGTAGAACAGATGGCTACTTCCTTGACCAAGGATCCTAATTTCAGAGCAGCACTAGTTGCCGCCATCTCTGGAAAAATGTTGCACAATAATAATTAA 993 0.4189 MLLSLHKLNLNLSPCSSSGIYLAVMDYSSWINTSLDLNINLHRVHEELPKKQVENNFFSLDLEVKKSSVKQESAGALAEELKRVSAENKKLTEMLTEMCENYNTLRSNLMEYMRKNPDKELSSSKKRKSASSNNNSTIPMGVNGTSESSSTDEESCKNPKEDMKTKISRVYMRTEASDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVDDQSVLVATYEGEHNHTHPSQMEVTTGSNRSVSCSASLSSSAPTVTLDWTKSKSSSESKNVNPKTESPEVPQVLVEQMATSLTKDPNFRAALVAAISGKMLHNNN* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso15g0033 330 MobiDBLite consensus disorder prediction 117 168 - -
Gso15g0033 330 MobiDBLite consensus disorder prediction 127 152 - -
Gso15g0033 330 Gene3D WRKY domain 166 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso15g0033 330 ProSiteProfiles WRKY domain profile. 178 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso15g0033 330 MobiDBLite consensus disorder prediction 238 296 - -
Gso15g0033 330 Pfam WRKY DNA -binding domain 184 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso15g0033 330 PANTHER TRANSCRIPTION FACTOR 25 329 - -
Gso15g0033 330 MobiDBLite consensus disorder prediction 153 168 - -
Gso15g0033 330 Coils Coil 74 101 - -
Gso15g0033 330 SMART WRKY_cls 183 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso15g0033 330 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 25 329 IPR044810 GO:0003700
Gso15g0033 330 SUPERFAMILY WRKY DNA-binding domain 180 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso15g0033 330 MobiDBLite consensus disorder prediction 244 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso15g0033 Gso-Chr15 290524 292470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso15g0033 28 330 WRKY Transcription Factor Family AT1G80840 51.553 1.99e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso15g0033 WRKY 4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso15g0033 - - gsj:114388658 609.372